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The map label for this gene is flgC [H]

Identifier: 221636059

GI number: 221636059

Start: 644506

End: 644961

Strand: Reverse

Name: flgC [H]

Synonym: trd_A0653

Alternate gene names: 221636059

Gene position: 644961-644506 (Counterclockwise)

Preceding gene: 221636060

Following gene: 221636058

Centisome position: 70.28

GC content: 64.69

Gene sequence:

>456_bases
ATGGGAATCCTCGAGACGATGCGCGTCAGTCTCTCGGCGCTCACCGCGCAACGCGTGCGGATGGACGTCACGGCGTCGAA
CCTGGCCAACGTCGATACGACGCGGACGCCGCAAGGCGGGCCGTATCTGCGTCGGCAAGTCGTTTTCGCGACCGAGCAGC
CCAGCCCGTTCGCTCGGCTCGTGCAAACGCGGACGGGACTGGTCGAAACGACCCCGAGCGCTGGGCGCGGGGTGCAAGTG
GCTGGGATCGTCGTCGATCGCCGGGCGGTGCGGGAAGTCTACGACCCGACTCATCCCGATGCGGACGCCAATGGGATCGT
GCGGTATCCGGATATCGATGTGGTGAGCGAGATGACTAATCTCATGGCAGCCACGCGAGCCTACGAGGCCAACGTCACAG
TTCTCGATGCCTTGAAGACGATGGCGATGCGTGCCTTGAGCATCGGGCGTGCCTGA

Upstream 100 bases:

>100_bases
CCGACAGAGCTTCCGACCGACAGGGTATCGGCAGGTGGGGCGCCCCTGCGTAGTGTTGGTCATGCGAGAGCGCTGTTCGA
GACGAGAGGGAAGGGCGGCG

Downstream 100 bases:

>100_bases
GCCGGTCGGCGGTAAGGGAGGGAGGCCGACGTGAGCATCGCGCCGATTCCACCGATCTCCGCTGAGATCGCGCCGGTCGG
GACGGCGGCTGCGCCCAAGC

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MGILETMRVSLSALTAQRVRMDVTASNLANVDTTRTPQGGPYLRRQVVFATEQPSPFARLVQTRTGLVETTPSAGRGVQV
AGIVVDRRAVREVYDPTHPDADANGIVRYPDIDVVSEMTNLMAATRAYEANVTVLDALKTMAMRALSIGRA

Sequences:

>Translated_151_residues
MGILETMRVSLSALTAQRVRMDVTASNLANVDTTRTPQGGPYLRRQVVFATEQPSPFARLVQTRTGLVETTPSAGRGVQV
AGIVVDRRAVREVYDPTHPDADANGIVRYPDIDVVSEMTNLMAATRAYEANVTVLDALKTMAMRALSIGRA
>Mature_150_residues
GILETMRVSLSALTAQRVRMDVTASNLANVDTTRTPQGGPYLRRQVVFATEQPSPFARLVQTRTGLVETTPSAGRGVQVA
GIVVDRRAVREVYDPTHPDADANGIVRYPDIDVVSEMTNLMAATRAYEANVTVLDALKTMAMRALSIGRA

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=151, Percent_Identity=40.3973509933775, Blast_Score=112, Evalue=9e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 16360; Mature: 16229

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILETMRVSLSALTAQRVRMDVTASNLANVDTTRTPQGGPYLRRQVVFATEQPSPFARL
CCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHH
VQTRTGLVETTPSAGRGVQVAGIVVDRRAVREVYDPTHPDADANGIVRYPDIDVVSEMTN
HHHHCCCEECCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHH
LMAATRAYEANVTVLDALKTMAMRALSIGRA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GILETMRVSLSALTAQRVRMDVTASNLANVDTTRTPQGGPYLRRQVVFATEQPSPFARL
CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHH
VQTRTGLVETTPSAGRGVQVAGIVVDRRAVREVYDPTHPDADANGIVRYPDIDVVSEMTN
HHHHCCCEECCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHH
LMAATRAYEANVTVLDALKTMAMRALSIGRA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]