| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is plsY1 [H]
Identifier: 221635987
GI number: 221635987
Start: 574314
End: 574955
Strand: Reverse
Name: plsY1 [H]
Synonym: trd_A0581
Alternate gene names: 221635987
Gene position: 574955-574314 (Counterclockwise)
Preceding gene: 221635989
Following gene: 221635986
Centisome position: 62.65
GC content: 65.11
Gene sequence:
>642_bases ATGGAGAGCGTGCTTCTGCTGCTCGCCGGATATCTCCTCGGCTCCGTACCGACCGCTCAGATCGCTGCCCAGCTCCTCGC GGGAGTCGATCTGCGGGAGCGCTCGCCGACGATCAGTGGCTCGGGAGTCTACTATCTGGTCGCGCGCTGGGCGGTGGTTC CGGTCGGTCTGATCGACGTCTTGAAGGGGTACCTCGCGACCGTACTGCCCTTACAGGTCGGAGCCAGTTCGGAGCTGGCT ATGGCGTGTGGTTTGGCAGCCGTCGTCGGTCACAACTGGTCACTGTGGCTCGGCTTTCGCGGTGGGCGCGGGATCAGTCC GTTTCTCGGATTCCTGCTCGTCGTCTTCCCCATGGGAGTCTTCGTCGTGCTCGCCGCGTTGGCGATCGGAAGGCTCGTGC GGCGCACTCCGGTGGTCGCGTTGCTCGGGCTCCTCTCGTTACCGGGCGTGATCATCGCGCTCGGTGGATCCGACGCGGCA TTGCGGGGCAGTCTCGGTATGCTCGCGATCACGATCGTCAAGCGGCTGGAAGCGAACCGGCGGCGACTTCCGCGTGATCC GGTTGCTCGGCAGACTGTTCTCTGGCGGCGATTCTGGTTGGATCGCGATGAGGAGCGGTGGCCTCCCGCGATGGAGGGTT GA
Upstream 100 bases:
>100_bases ATCCATCGCTCCGCCCTGTTGCCTCGTACTCGCCCCGTTCGGGCCGATTGTAGCAAGCGAGCGCTCTGTTTCTATACTCA TAGACAATAGGAGTGCCAAC
Downstream 100 bases:
>100_bases CCTACCGTGCTCGCGGTCGTGACTGACAGCATCGCGTGCTTACCCCTCGAACTCGTCGAGCGCTACCACATCCGTGTGGT GCCGGTGCGCATCGTTCGCG
Product: membrane protein
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase 1; Acyl-phosphate--glycerol-3-phosphate acyltransferase 1; G3P acyltransferase 1; GPAT 1; Lysophosphatidic acid synthase 1; LPA synthase 1 [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MESVLLLLAGYLLGSVPTAQIAAQLLAGVDLRERSPTISGSGVYYLVARWAVVPVGLIDVLKGYLATVLPLQVGASSELA MACGLAAVVGHNWSLWLGFRGGRGISPFLGFLLVVFPMGVFVVLAALAIGRLVRRTPVVALLGLLSLPGVIIALGGSDAA LRGSLGMLAITIVKRLEANRRRLPRDPVARQTVLWRRFWLDRDEERWPPAMEG
Sequences:
>Translated_213_residues MESVLLLLAGYLLGSVPTAQIAAQLLAGVDLRERSPTISGSGVYYLVARWAVVPVGLIDVLKGYLATVLPLQVGASSELA MACGLAAVVGHNWSLWLGFRGGRGISPFLGFLLVVFPMGVFVVLAALAIGRLVRRTPVVALLGLLSLPGVIIALGGSDAA LRGSLGMLAITIVKRLEANRRRLPRDPVARQTVLWRRFWLDRDEERWPPAMEG >Mature_213_residues MESVLLLLAGYLLGSVPTAQIAAQLLAGVDLRERSPTISGSGVYYLVARWAVVPVGLIDVLKGYLATVLPLQVGASSELA MACGLAAVVGHNWSLWLGFRGGRGISPFLGFLLVVFPMGVFVVLAALAIGRLVRRTPVVALLGLLSLPGVIIALGGSDAA LRGSLGMLAITIVKRLEANRRRLPRDPVARQTVLWRRFWLDRDEERWPPAMEG
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP [H]
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003811 [H]
Pfam domain/function: PF02660 DUF205 [H]
EC number: NA
Molecular weight: Translated: 22816; Mature: 22816
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVLLLLAGYLLGSVPTAQIAAQLLAGVDLRERSPTISGSGVYYLVARWAVVPVGLIDV CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LKGYLATVLPLQVGASSELAMACGLAAVVGHNWSLWLGFRGGRGISPFLGFLLVVFPMGV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH FVVLAALAIGRLVRRTPVVALLGLLSLPGVIIALGGSDAALRGSLGMLAITIVKRLEANR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH RRLPRDPVARQTVLWRRFWLDRDEERWPPAMEG HCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MESVLLLLAGYLLGSVPTAQIAAQLLAGVDLRERSPTISGSGVYYLVARWAVVPVGLIDV CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LKGYLATVLPLQVGASSELAMACGLAAVVGHNWSLWLGFRGGRGISPFLGFLLVVFPMGV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH FVVLAALAIGRLVRRTPVVALLGLLSLPGVIIALGGSDAALRGSLGMLAITIVKRLEANR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH RRLPRDPVARQTVLWRRFWLDRDEERWPPAMEG HCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA