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The map label for this gene is degV [H]

Identifier: 221635986

GI number: 221635986

Start: 573465

End: 574307

Strand: Reverse

Name: degV [H]

Synonym: trd_A0580

Alternate gene names: 221635986

Gene position: 574307-573465 (Counterclockwise)

Preceding gene: 221635987

Following gene: 221635983

Centisome position: 62.58

GC content: 65.36

Gene sequence:

>843_bases
GTGCTCGCGGTCGTGACTGACAGCATCGCGTGCTTACCCCTCGAACTCGTCGAGCGCTACCACATCCGTGTGGTGCCGGT
GCGCATCGTTCGCGGCGAGCGAGTCTATCGCGATGGCATCGATGTGACGCCGGAGGAGGCATTCGCGTGGCTGGAAGCGG
GAGAAGTGCTCACGACGGCGCAGCCGGCCGTGGGTGAGTTCCTCGACACGTACGAGGAGCTGTCGCGCATCGCGACGGGG
ATCGTGTCGATTCACGTCTCCTCCGGCGTGACTGGTGTGGTACAGGCTGCGGCGGCGGCAGCTCGACTGATCGAGCGGAT
TCCGATCCGCGTCGTCGATAGCCGAGCAGCGACCATGGCGGAAGGTTTTCTCGTTCTCGCGGCAGCACGCTTGGCTGAGC
AGGGGGCGGACTTGGAGACGATCGTGCGCCGGGTCAAAGAACTCCGGTCACAGGTGCGGTTTTTCGCTGTGCTGGACACC
GTTACCTATCTCGTGCGGAGCGGGCGTGCGCCGTGGCTCGCCCAGCTGGCAGTCGATATGCTGCAGGTCAAGCCCATTTT
GACGCTGCGGGATGGGAAGATCGTCTCACTGGAGCGGGTCAGGACGCGCCGACGAGCGATCGAGGCGATGCTGCGTCGCA
TGGAGCAGGACGTGGGTGAACGGCCGGTGCACGTGGGGGTGCTGCACGCGGGAGCGGCCGAGGAAGCAGCGGAACTACGG
CAGACGATCGAGGAGCGATTCCAGGTCGTGGAATCGTTCGTCACCCCCTTCACGGCGGCGATGGCCATCCACACCGGACC
GGGGTTACTCGGGTTGGCGTACTGTGCGGAGTCGCCTGCCTGA

Upstream 100 bases:

>100_bases
TCCGCGTGATCCGGTTGCTCGGCAGACTGTTCTCTGGCGGCGATTCTGGTTGGATCGCGATGAGGAGCGGTGGCCTCCCG
CGATGGAGGGTTGACCTACC

Downstream 100 bases:

>100_bases
CGGACTCACTCCGGCGGCCATGGTGTGTTCGTGCCCGGGCCGAGGCTACTATAGGTTGCCTCGACGTACTGACGGATCGT
GCGGAGCGAGTGTCCTTCTG

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLAVVTDSIACLPLELVERYHIRVVPVRIVRGERVYRDGIDVTPEEAFAWLEAGEVLTTAQPAVGEFLDTYEELSRIATG
IVSIHVSSGVTGVVQAAAAAARLIERIPIRVVDSRAATMAEGFLVLAAARLAEQGADLETIVRRVKELRSQVRFFAVLDT
VTYLVRSGRAPWLAQLAVDMLQVKPILTLRDGKIVSLERVRTRRRAIEAMLRRMEQDVGERPVHVGVLHAGAAEEAAELR
QTIEERFQVVESFVTPFTAAMAIHTGPGLLGLAYCAESPA

Sequences:

>Translated_280_residues
MLAVVTDSIACLPLELVERYHIRVVPVRIVRGERVYRDGIDVTPEEAFAWLEAGEVLTTAQPAVGEFLDTYEELSRIATG
IVSIHVSSGVTGVVQAAAAAARLIERIPIRVVDSRAATMAEGFLVLAAARLAEQGADLETIVRRVKELRSQVRFFAVLDT
VTYLVRSGRAPWLAQLAVDMLQVKPILTLRDGKIVSLERVRTRRRAIEAMLRRMEQDVGERPVHVGVLHAGAAEEAAELR
QTIEERFQVVESFVTPFTAAMAIHTGPGLLGLAYCAESPA
>Mature_280_residues
MLAVVTDSIACLPLELVERYHIRVVPVRIVRGERVYRDGIDVTPEEAFAWLEAGEVLTTAQPAVGEFLDTYEELSRIATG
IVSIHVSSGVTGVVQAAAAAARLIERIPIRVVDSRAATMAEGFLVLAAARLAEQGADLETIVRRVKELRSQVRFFAVLDT
VTYLVRSGRAPWLAQLAVDMLQVKPILTLRDGKIVSLERVRTRRRAIEAMLRRMEQDVGERPVHVGVLHAGAAEEAAELR
QTIEERFQVVESFVTPFTAAMAIHTGPGLLGLAYCAESPA

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30673; Mature: 30673

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVVTDSIACLPLELVERYHIRVVPVRIVRGERVYRDGIDVTPEEAFAWLEAGEVLTTA
CEEEEECCHHHHHHHHHHHHCEEEEEEEEECCCCHHHCCCCCCHHHHHHHHHHCCHHHCC
QPAVGEFLDTYEELSRIATGIVSIHVSSGVTGVVQAAAAAARLIERIPIRVVDSRAATMA
CHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCHHEECCHHHHHH
EGFLVLAAARLAEQGADLETIVRRVKELRSQVRFFAVLDTVTYLVRSGRAPWLAQLAVDM
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LQVKPILTLRDGKIVSLERVRTRRRAIEAMLRRMEQDVGERPVHVGVLHAGAAEEAAELR
HHHCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
QTIEERFQVVESFVTPFTAAMAIHTGPGLLGLAYCAESPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MLAVVTDSIACLPLELVERYHIRVVPVRIVRGERVYRDGIDVTPEEAFAWLEAGEVLTTA
CEEEEECCHHHHHHHHHHHHCEEEEEEEEECCCCHHHCCCCCCHHHHHHHHHHCCHHHCC
QPAVGEFLDTYEELSRIATGIVSIHVSSGVTGVVQAAAAAARLIERIPIRVVDSRAATMA
CHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCHHEECCHHHHHH
EGFLVLAAARLAEQGADLETIVRRVKELRSQVRFFAVLDTVTYLVRSGRAPWLAQLAVDM
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LQVKPILTLRDGKIVSLERVRTRRRAIEAMLRRMEQDVGERPVHVGVLHAGAAEEAAELR
HHHCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
QTIEERFQVVESFVTPFTAAMAIHTGPGLLGLAYCAESPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 9384377; 3141378 [H]