| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635989
Identifier: 221635989
GI number: 221635989
Start: 576876
End: 577241
Strand: Reverse
Name: 221635989
Synonym: trd_A0583
Alternate gene names: NA
Gene position: 577241-576876 (Counterclockwise)
Preceding gene: 221635991
Following gene: 221635987
Centisome position: 62.9
GC content: 64.48
Gene sequence:
>366_bases ATGGAGACGCGTCCAAGCGTGCGCACAACAGGTCTCTCCGAACTGATCGCTGCGCTCTGGCGCCGGGGCGTGCCGGTTGT CGGCTGGGCGGAAAGCCGGGAAGGGATCGTCCTCTTGGCCGATGGGGGAGCATCCGTGCTGATTCCGCGGGCACGACTGG GTGAGCGGACCGATCTGGTGGCAAACGCGCTCGTCGAACGATTGCCGCGTCGGGCTGTGCTGGAAACGCCGGTGTCTCCG GAGTTGCTTCCGCAGTTCGACCAACGCGAACTGGCCTGGCTGCTCTTCCTACGCTGGTTGCGCGAAAGGAACCAAGTGGA ACCAGCGATACCTTCGCCAGAGCGTGTCCACCCTGTGGACGGATAG
Upstream 100 bases:
>100_bases GATGACAGCGTCGAGACCGATGGCGACATGCTTTGGGACAAATGTGCTACATTCCCTCCTTCGAGGATTGCCGATGCTCC TGATCGAGGGAGCATGAGCG
Downstream 100 bases:
>100_bases TGATCGCATTTCCTGCTCTGTTGGGTGAAGGGAATCCATTACCCCACAAACGCCACGGTTGATGGCAGGTCACCGACTGC GCTGGTATTTTCTCCTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues METRPSVRTTGLSELIAALWRRGVPVVGWAESREGIVLLADGGASVLIPRARLGERTDLVANALVERLPRRAVLETPVSP ELLPQFDQRELAWLLFLRWLRERNQVEPAIPSPERVHPVDG
Sequences:
>Translated_121_residues METRPSVRTTGLSELIAALWRRGVPVVGWAESREGIVLLADGGASVLIPRARLGERTDLVANALVERLPRRAVLETPVSP ELLPQFDQRELAWLLFLRWLRERNQVEPAIPSPERVHPVDG >Mature_121_residues METRPSVRTTGLSELIAALWRRGVPVVGWAESREGIVLLADGGASVLIPRARLGERTDLVANALVERLPRRAVLETPVSP ELLPQFDQRELAWLLFLRWLRERNQVEPAIPSPERVHPVDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13560; Mature: 13560
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRPSVRTTGLSELIAALWRRGVPVVGWAESREGIVLLADGGASVLIPRARLGERTDLV CCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCEEEECHHHCCCHHHHH ANALVERLPRRAVLETPVSPELLPQFDQRELAWLLFLRWLRERNQVEPAIPSPERVHPVD HHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC G C >Mature Secondary Structure METRPSVRTTGLSELIAALWRRGVPVVGWAESREGIVLLADGGASVLIPRARLGERTDLV CCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCEEEECHHHCCCHHHHH ANALVERLPRRAVLETPVSPELLPQFDQRELAWLLFLRWLRERNQVEPAIPSPERVHPVD HHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA