Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635974

Identifier: 221635974

GI number: 221635974

Start: 562844

End: 563458

Strand: Reverse

Name: 221635974

Synonym: trd_A0568

Alternate gene names: NA

Gene position: 563458-562844 (Counterclockwise)

Preceding gene: 221635975

Following gene: 221635973

Centisome position: 61.4

GC content: 65.37

Gene sequence:

>615_bases
GTGACGAGGGATAAGCGAGTCGGTGCCATCATCCTCGCGGGAGGACGCTCGGAGCGGCTGGGACGTGCGAAGCAGCTGTT
GCCCTGGAACGGCCGCACGCTCGTCGAGGCGGTCGTGGAGGAGGTCTGTCGTGCCGAGCGACTGGCGGAGGTTCTCTTGG
TGTTACGGCGAGACGTGGCTGAGGCGCTCGGCAAGCGGGCGGGAGAGCGGCTGGGGTGTGCGCGGATCGTCTTTCCGGAT
GAGACGGGTGAAGGATGTGCAGCATCCTATCGGAGCGGTCTCGCGGCGCTGGAGGAGAGCGAGCTCGATGCGGTCGTGAT
TCTCCTCGCTGACCAGCCGGGTGTACGGGTGGAAACGATCGAACGAGTGATCGCCGGGTGGGAGAGTTCAGGGGCAGCGA
TCGCGGTGGTGCGGTACCGAGACAGGGAGGGGCATCCGCTGGTCTTCGATCGTTCGCTCTTTGCGGAACTGCGACAACTG
CGGGGTGAGAAGGCGGCGTGGAAACTGGTGGATCGGTATCGTGAGGGCGTGTGCGTGGTCGAGATCGAGGAGTCAATGCC
GGGGGACATCGACACGTGGGAGGACTACGAGGCGAGCCGACGGAGAGGGGTCTGA

Upstream 100 bases:

>100_bases
AGAATACGGTCAAGGGGTATGTGCAAGAAGTCTTGCGGCGGTTAGGTGCCCGCAACCGGCTCGAAGCAGTGATGATCGCG
AATGAGCGGGGCTGGTTACG

Downstream 100 bases:

>100_bases
CGCGCTCCTCACGACATATCCCTCGTGGTTCTCGACAGCGAGGAGGTGAAGGTGAGCGAGAACGCAACGACCATCCTCAC
GGTCGATGAATTGGTCACGA

Product: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase

Products: NA

Alternate protein names: MobA-Like Protein-Like Protein; MobA-Like Protein-Like; Carbon Monoxide Dehydrogenase Accesory Protein; Molybdenum Cofactor Biosynthesis Protein

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTRDKRVGAIILAGGRSERLGRAKQLLPWNGRTLVEAVVEEVCRAERLAEVLLVLRRDVAEALGKRAGERLGCARIVFPD
ETGEGCAASYRSGLAALEESELDAVVILLADQPGVRVETIERVIAGWESSGAAIAVVRYRDREGHPLVFDRSLFAELRQL
RGEKAAWKLVDRYREGVCVVEIEESMPGDIDTWEDYEASRRRGV

Sequences:

>Translated_204_residues
MTRDKRVGAIILAGGRSERLGRAKQLLPWNGRTLVEAVVEEVCRAERLAEVLLVLRRDVAEALGKRAGERLGCARIVFPD
ETGEGCAASYRSGLAALEESELDAVVILLADQPGVRVETIERVIAGWESSGAAIAVVRYRDREGHPLVFDRSLFAELRQL
RGEKAAWKLVDRYREGVCVVEIEESMPGDIDTWEDYEASRRRGV
>Mature_203_residues
TRDKRVGAIILAGGRSERLGRAKQLLPWNGRTLVEAVVEEVCRAERLAEVLLVLRRDVAEALGKRAGERLGCARIVFPDE
TGEGCAASYRSGLAALEESELDAVVILLADQPGVRVETIERVIAGWESSGAAIAVVRYRDREGHPLVFDRSLFAELRQLR
GEKAAWKLVDRYREGVCVVEIEESMPGDIDTWEDYEASRRRGV

Specific function: Unknown

COG id: COG2068

COG function: function code R; Uncharacterized MobA-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22660; Mature: 22529

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDKRVGAIILAGGRSERLGRAKQLLPWNGRTLVEAVVEEVCRAERLAEVLLVLRRDVA
CCCCCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALGKRAGERLGCARIVFPDETGEGCAASYRSGLAALEESELDAVVILLADQPGVRVETI
HHHHHHCCHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHH
ERVIAGWESSGAAIAVVRYRDREGHPLVFDRSLFAELRQLRGEKAAWKLVDRYREGVCVV
HHHHHCCCCCCCEEEEEEEECCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHCCEEEE
EIEESMPGDIDTWEDYEASRRRGV
EECCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TRDKRVGAIILAGGRSERLGRAKQLLPWNGRTLVEAVVEEVCRAERLAEVLLVLRRDVA
CCCCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALGKRAGERLGCARIVFPDETGEGCAASYRSGLAALEESELDAVVILLADQPGVRVETI
HHHHHHCCHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHH
ERVIAGWESSGAAIAVVRYRDREGHPLVFDRSLFAELRQLRGEKAAWKLVDRYREGVCVV
HHHHHCCCCCCCEEEEEEEECCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHCCEEEE
EIEESMPGDIDTWEDYEASRRRGV
EECCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA