| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635959
Identifier: 221635959
GI number: 221635959
Start: 545804
End: 545998
Strand: Reverse
Name: 221635959
Synonym: trd_A0553
Alternate gene names: NA
Gene position: 545998-545804 (Counterclockwise)
Preceding gene: 221635960
Following gene: 221635955
Centisome position: 59.49
GC content: 67.18
Gene sequence:
>195_bases GTGTCCTCCCGAGCAGTGGTGATCGGTACCGGTCGCGAACTCGGAGACGGATCCGGGGAAGTCGTCTGGACCCGAGTGGC GGGCGAGCACGATCGTGCGTCGTCACCCGGGCGAGCATTGGTTCACGCCCGTTCGGTCATGCGGCGGCGTCCGGAGCTCG TGCAAGACCTCGATCAGCCAGCGGATCTCGCCTGA
Upstream 100 bases:
>100_bases CACCGGCCGGACCGCCTTCCTGACCGCGCTGCGCGCACTGCGTCAGTTGCTCGAGGGTATTCCCGCACCGTCTTGACCGA CCGGTGCACGAACCGACGGA
Downstream 100 bases:
>100_bases ACGAGCAGAGGGTCGGCGACCGTTTTTCTCATCCTTCTCCGTTTTTCTCATCCTTCTCAGAGTGGCCTCAGACGGACGCA CCGAGGCTGTCGAGCACGGC
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MSSRAVVIGTGRELGDGSGEVVWTRVAGEHDRASSPGRALVHARSVMRRRPELVQDLDQPADLA
Sequences:
>Translated_64_residues MSSRAVVIGTGRELGDGSGEVVWTRVAGEHDRASSPGRALVHARSVMRRRPELVQDLDQPADLA >Mature_63_residues SSRAVVIGTGRELGDGSGEVVWTRVAGEHDRASSPGRALVHARSVMRRRPELVQDLDQPADLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6880; Mature: 6749
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRAVVIGTGRELGDGSGEVVWTRVAGEHDRASSPGRALVHARSVMRRRPELVQDLDQP CCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCC ADLA CCCC >Mature Secondary Structure SSRAVVIGTGRELGDGSGEVVWTRVAGEHDRASSPGRALVHARSVMRRRPELVQDLDQP CCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCC ADLA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA