| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635955
Identifier: 221635955
GI number: 221635955
Start: 543848
End: 544261
Strand: Reverse
Name: 221635955
Synonym: trd_A0549
Alternate gene names: NA
Gene position: 544261-543848 (Counterclockwise)
Preceding gene: 221635959
Following gene: 221635954
Centisome position: 59.3
GC content: 63.53
Gene sequence:
>414_bases GTGGCCGTGATTCCAGAGTACCTCCGAGACTTCCTGCTCGCACCGCGCTTCGCTGTGCTGGCGACGATCGCGCCAGACGG TCTCCCGCGCCAATCGGTCATGTGGTATGACGTGCTGGATCAGGAAACGATTCTGATGAATACCGCCGTCGGTCGCGCCA AGCTGGACGATCTCCGGCGCGACCCTCGTGCCTCGCTCTGCATCGCCGATGGCTATCGCTACGTGACAGTGATCGGGCGA GTCGAGTTGATCGAGGACCAAGAACGGGCACAGGCCGATATCGCGCGCCTGGCGGTCCGCTATGTGGGGGAGGAGGAAGC TCGTTCCTGGATCCCACAGTTCCGGGCACAACGACGGGTGACGCTCTTGTTGCGGATCGAGCGGGTGCTCGCGCATGGCT TTGCGGGAGCCTGA
Upstream 100 bases:
>100_bases AAGGTGACCGACGCCGAGGAGACAAATAGGCTTACCGAACCAACGCGCTCGCGTATCATGCTCGGGGTCGGTCGATCGAC GGGTGAGGGAGGAACGATCA
Downstream 100 bases:
>100_bases ACGATGACCGACGAGGTGCGCCTCATCCCGATCCGGAGGATTCCGGAAGCCCGTCCGGGCGACTCGGTCGCTGAGCTCGT CCTCACCGGCATGGCAGCCT
Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MAVIPEYLRDFLLAPRFAVLATIAPDGLPRQSVMWYDVLDQETILMNTAVGRAKLDDLRRDPRASLCIADGYRYVTVIGR VELIEDQERAQADIARLAVRYVGEEEARSWIPQFRAQRRVTLLLRIERVLAHGFAGA
Sequences:
>Translated_137_residues MAVIPEYLRDFLLAPRFAVLATIAPDGLPRQSVMWYDVLDQETILMNTAVGRAKLDDLRRDPRASLCIADGYRYVTVIGR VELIEDQERAQADIARLAVRYVGEEEARSWIPQFRAQRRVTLLLRIERVLAHGFAGA >Mature_136_residues AVIPEYLRDFLLAPRFAVLATIAPDGLPRQSVMWYDVLDQETILMNTAVGRAKLDDLRRDPRASLCIADGYRYVTVIGRV ELIEDQERAQADIARLAVRYVGEEEARSWIPQFRAQRRVTLLLRIERVLAHGFAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15611; Mature: 15480
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIPEYLRDFLLAPRFAVLATIAPDGLPRQSVMWYDVLDQETILMNTAVGRAKLDDLRR CCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHCCCHHHHHHHHC DPRASLCIADGYRYVTVIGRVELIEDQERAQADIARLAVRYVGEEEARSWIPQFRAQRRV CCCCCEEEECCCEEEEEEHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH TLLLRIERVLAHGFAGA HHHHHHHHHHHHCCCCC >Mature Secondary Structure AVIPEYLRDFLLAPRFAVLATIAPDGLPRQSVMWYDVLDQETILMNTAVGRAKLDDLRR CCCHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHCCCHHHHHHHHC DPRASLCIADGYRYVTVIGRVELIEDQERAQADIARLAVRYVGEEEARSWIPQFRAQRRV CCCCCEEEECCCEEEEEEHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH TLLLRIERVLAHGFAGA HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA