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The map label for this gene is 221635960

Identifier: 221635960

GI number: 221635960

Start: 546023

End: 546850

Strand: Reverse

Name: 221635960

Synonym: trd_A0554

Alternate gene names: NA

Gene position: 546850-546023 (Counterclockwise)

Preceding gene: 221635962

Following gene: 221635959

Centisome position: 59.59

GC content: 61.47

Gene sequence:

>828_bases
ATGCGCTGGAAGCTGGCAGCATTCGCCGACGAAATCCACCCCGATCCGGCTCCTGCCCTCGACACGATGCACGCGGCAGG
GATAAACACGGTGGAGTTGCGCAGCGCGTGGGGGAAAAATGTGCTCGATTTGACTGACGAGGAATTGGCAGCGCTCGCCC
AAGAGGTCGCCCGACGCACGATGACTGTAGCAGTGATCGCTTCCCCAGTCGGCAAAAGTCTCATCACCGACCCAGCCGCC
TTCCAATCGGCGCGCCTCGACCGAGCTCTCGCCATCGCCCGTCGTTTCGGCAGCTGGGGAGTTCGCGTTTTCTCCTTCTA
CCTGCCACCAGGTGAGCCTCCTGAGCGCTACCGGGACGAAGTGCTGCGGCGTATCGAACAATGGGTCCATCGTGCCGCGG
AATCAGGCATTACCTTGCTGCACGAAAATGAGAAGGAGATCTATGGTGACATTCCGCACCGCTGCTTCGATCTCTTGAAT
TCGATCGGTTCGCCGTGGTTCAGGGCAGTGTGGGATCCAGCGAATTTCGTTCGATGTGGCGTGCGGCCCTTCTCCACGGG
ATTTGCCATGCTCGCACCGTTCATCGCTCATGTCCATGTCAAAGATGCAGTCCTCGGTTCCGGAGAAGTGACGGTCGCAG
GTGCGGGCGATGGCGAAATCGCCGAAACGCTCGCTGCACTCGCCACTCGCGGTTACCGCGGCTACCTCTCCCTGGAGCCG
CACCTTCTGATCGCTGGATCGCACGGGGGCTTCACCGGCCGGACCGCCTTCCTGACCGCGCTGCGCGCACTGCGTCAGTT
GCTCGAGGGTATTCCCGCACCGTCTTGA

Upstream 100 bases:

>100_bases
GCCGCAGAAAGGTCAGTGAGGCTCGCGAGCGCCGACACTGTTGAGCGTCGCGGTGGCGTGTGCGCTGAGATGGGATGCAA
TTGCGGGTTGGTTTCGCGTC

Downstream 100 bases:

>100_bases
CCGACCGGTGCACGAACCGACGGAGTGTCCTCCCGAGCAGTGGTGATCGGTACCGGTCGCGAACTCGGAGACGGATCCGG
GGAAGTCGTCTGGACCCGAG

Product: xylose isomerase domain protein TIM barrel

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; TIM Barrel Xylose Isomerase; Xylose Isomerase Domain-Containing Protein TIM Barrel

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRWKLAAFADEIHPDPAPALDTMHAAGINTVELRSAWGKNVLDLTDEELAALAQEVARRTMTVAVIASPVGKSLITDPAA
FQSARLDRALAIARRFGSWGVRVFSFYLPPGEPPERYRDEVLRRIEQWVHRAAESGITLLHENEKEIYGDIPHRCFDLLN
SIGSPWFRAVWDPANFVRCGVRPFSTGFAMLAPFIAHVHVKDAVLGSGEVTVAGAGDGEIAETLAALATRGYRGYLSLEP
HLLIAGSHGGFTGRTAFLTALRALRQLLEGIPAPS

Sequences:

>Translated_275_residues
MRWKLAAFADEIHPDPAPALDTMHAAGINTVELRSAWGKNVLDLTDEELAALAQEVARRTMTVAVIASPVGKSLITDPAA
FQSARLDRALAIARRFGSWGVRVFSFYLPPGEPPERYRDEVLRRIEQWVHRAAESGITLLHENEKEIYGDIPHRCFDLLN
SIGSPWFRAVWDPANFVRCGVRPFSTGFAMLAPFIAHVHVKDAVLGSGEVTVAGAGDGEIAETLAALATRGYRGYLSLEP
HLLIAGSHGGFTGRTAFLTALRALRQLLEGIPAPS
>Mature_275_residues
MRWKLAAFADEIHPDPAPALDTMHAAGINTVELRSAWGKNVLDLTDEELAALAQEVARRTMTVAVIASPVGKSLITDPAA
FQSARLDRALAIARRFGSWGVRVFSFYLPPGEPPERYRDEVLRRIEQWVHRAAESGITLLHENEKEIYGDIPHRCFDLLN
SIGSPWFRAVWDPANFVRCGVRPFSTGFAMLAPFIAHVHVKDAVLGSGEVTVAGAGDGEIAETLAALATRGYRGYLSLEP
HLLIAGSHGGFTGRTAFLTALRALRQLLEGIPAPS

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29987; Mature: 29987

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWKLAAFADEIHPDPAPALDTMHAAGINTVELRSAWGKNVLDLTDEELAALAQEVARRT
CCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
MTVAVIASPVGKSLITDPAAFQSARLDRALAIARRFGSWGVRVFSFYLPPGEPPERYRDE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHH
VLRRIEQWVHRAAESGITLLHENEKEIYGDIPHRCFDLLNSIGSPWFRAVWDPANFVRCG
HHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHCC
VRPFSTGFAMLAPFIAHVHVKDAVLGSGEVTVAGAGDGEIAETLAALATRGYRGYLSLEP
CCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECC
HLLIAGSHGGFTGRTAFLTALRALRQLLEGIPAPS
EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRWKLAAFADEIHPDPAPALDTMHAAGINTVELRSAWGKNVLDLTDEELAALAQEVARRT
CCCCHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
MTVAVIASPVGKSLITDPAAFQSARLDRALAIARRFGSWGVRVFSFYLPPGEPPERYRDE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHH
VLRRIEQWVHRAAESGITLLHENEKEIYGDIPHRCFDLLNSIGSPWFRAVWDPANFVRCG
HHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHCC
VRPFSTGFAMLAPFIAHVHVKDAVLGSGEVTVAGAGDGEIAETLAALATRGYRGYLSLEP
CCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECC
HLLIAGSHGGFTGRTAFLTALRALRQLLEGIPAPS
EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA