Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635890

Identifier: 221635890

GI number: 221635890

Start: 472926

End: 473387

Strand: Reverse

Name: 221635890

Synonym: trd_A0484

Alternate gene names: NA

Gene position: 473387-472926 (Counterclockwise)

Preceding gene: 221635891

Following gene: 221635889

Centisome position: 51.58

GC content: 66.45

Gene sequence:

>462_bases
ATGAGGGGTCTCGGTCACGCCACATTGGCTGGTTTGGCCGGTGCCGTCGCTTTCCTTTTCGCTATGGCCGTCGATCTCGC
GGTCCTGCGCCGACGGACCAACGATCTCCGGCTCCTGGCCGGGCTGCTTCCGGGAGGAGCTCGCTTTTGGCCGTTGCTCG
GGACGCTCATGCACCTGGCCAACGGTGCAGCGCTCGGTGTCCTCTACGGGCGCCTGCGGCGTGTGTTTCCGTTCTCTGGT
TGGCTCGCCGGATCGCTCTTCGCGCTCGCCGAGAATCTGGCACTCTGGCCGATCGTCGCGCTGCTCGATCGCGTCCATCC
GGAAATCCGTGCTGGCCGCCTGGAGCCCTTCAACCGGCCGGTCCCGTTCCTCCAAGAAGTCTGGCGGCACCTGGCGTATG
GCCTGACACTCGGCATCCTCTACGACCGCTGGCAGCGGAAGGAGGGCGAGCCGGCACCATGA

Upstream 100 bases:

>100_bases
TCCTGACTCCACCGCTCCTGGTTTGGTTGCTTCGCCCGCTGATCGCCGCGCGCCGGGCTGAACTTGCCACCACCACCGGG
CACGTGGAGGGAGCCACGTC

Downstream 100 bases:

>100_bases
ACGCGGCGCTCCTCGCCCGGCCCATGCTCCTCGAACCGGTCCTGGTCGAGCGCCCCTGGGGCGACCAGCGTCTGGCGCGC
TACCTCGGCAAATCGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MRGLGHATLAGLAGAVAFLFAMAVDLAVLRRRTNDLRLLAGLLPGGARFWPLLGTLMHLANGAALGVLYGRLRRVFPFSG
WLAGSLFALAENLALWPIVALLDRVHPEIRAGRLEPFNRPVPFLQEVWRHLAYGLTLGILYDRWQRKEGEPAP

Sequences:

>Translated_153_residues
MRGLGHATLAGLAGAVAFLFAMAVDLAVLRRRTNDLRLLAGLLPGGARFWPLLGTLMHLANGAALGVLYGRLRRVFPFSG
WLAGSLFALAENLALWPIVALLDRVHPEIRAGRLEPFNRPVPFLQEVWRHLAYGLTLGILYDRWQRKEGEPAP
>Mature_153_residues
MRGLGHATLAGLAGAVAFLFAMAVDLAVLRRRTNDLRLLAGLLPGGARFWPLLGTLMHLANGAALGVLYGRLRRVFPFSG
WLAGSLFALAENLALWPIVALLDRVHPEIRAGRLEPFNRPVPFLQEVWRHLAYGLTLGILYDRWQRKEGEPAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16885; Mature: 16885

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLGHATLAGLAGAVAFLFAMAVDLAVLRRRTNDLRLLAGLLPGGARFWPLLGTLMHLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
NGAALGVLYGRLRRVFPFSGWLAGSLFALAENLALWPIVALLDRVHPEIRAGRLEPFNRP
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCC
VPFLQEVWRHLAYGLTLGILYDRWQRKEGEPAP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRGLGHATLAGLAGAVAFLFAMAVDLAVLRRRTNDLRLLAGLLPGGARFWPLLGTLMHLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
NGAALGVLYGRLRRVFPFSGWLAGSLFALAENLALWPIVALLDRVHPEIRAGRLEPFNRP
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCC
VPFLQEVWRHLAYGLTLGILYDRWQRKEGEPAP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA