| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
Click here to switch to the map view.
The map label for this gene is yuaG [H]
Identifier: 221635831
GI number: 221635831
Start: 411196
End: 412803
Strand: Reverse
Name: yuaG [H]
Synonym: trd_A0425
Alternate gene names: 221635831
Gene position: 412803-411196 (Counterclockwise)
Preceding gene: 221635832
Following gene: 221635829
Centisome position: 44.98
GC content: 65.61
Gene sequence:
>1608_bases ATGAACTTCCCTCTCCCCGACGTCTTCCAGGCACTCTTCGCCATCCTGCTCGTCTTTCTCGCCTTCGCCGCACTCCTCGC GATCGTCAGCCGTAACATCATCAAGGTCCCGCCCAACATGGTCGCCGTCTTCTCGGGGCGCCGGCGCACCATCGTTGACC CGACGACCGGGGAGCGGCGCACCGTCGGTTACCGGCTGATCAAGGGCGGCTCGAGCATCCGTATCCCGATTGTCGAACGC GTCGACTTCCTCTCCCTCAACGTCATGACCATCCCCCTCAAGATCGCCTCAGCCTATACCAAGGAAGGTGTTCCAGTCTC CGTCGACGCCGTCGCCAATGTCAAGATCGGGTCCGACGACCAGATGTTGATGAACGCGATCGAGCGCTTCCTCGGTATGG AACAAGACCAGATCCGGAGCGTCATCTTCCAGACTCTAGAAGGACACTTGCGCTCGATCCTCGGCACCCTGACGGTCGAG CAGATCAACGCTGACCGGCAAGCCTTCGCCCAACGCCTCGCCGCCGAGTCGGCACAGGATCTCTCGCGGATGGGAATCGA GATCGACGTCCTGACCATCCAGCAGATCAGCGACCCGCAGGGCTATCTCGACGCGCTCGGCCAGCGACGGACCGCTGAAG TCAAGCGCGATGCCGAGGTCGGCAAAGCAGAAGCCGAGCGTGACGCACGGGTTCGGCGCGCGCAAGCGCTGCAACAAGCT GCCATCGCTGAAGCCATGGCCGAAGCGGAAATCGCCGCGGCGCAGAAAGAAGCGGAGGTGCGCAAGGCCCGTTACGAGGC TGAGGTGCAGGCCGAACGAGCGCGTGCTGCCCAGGCTGGCCCCCTGGCCGAAGCCGAGGCCCGACGCCAGGTCGTCGTCG CCGAGCAACAGGTCGAACTGGCTCGCACCGAAGCGGCTATCGCCGTGCAGGAAACCGAAGCCCGCCGCCGCGAGAAAGAG CTGGAAGCGACTGTCCTCAAGAGCGCCGAAGCGGAGCGACGCGCCACCATCATCCGCGCCGAGGCAGAACGAGAGGCCAC CATCCTGCGGGCCGAAGGAGAACGCCAGGCACAGGTCGTCCGCGCCGAAGCGGAAGCCCGCGAGCGGGAACTGGTGGGCA CTGGGGAAGCCGCTCGCATCCGCCAAATCGGTCAAGCTGAGGCGGAAGCCAAAAAGGCACTGGCTGAGGCCCTCCAGGCC GAACTGTTCGCCCAGGCCGAGGGGCAACGCGCTGCACTCCTCGCCGAAGCCGATGGCAAGCGCGCACTGGCCGACGCCCT CAATCACTATGGTCCGATCGCCATGCAGCTCCTCATGTACCAGGCCTTCGTCGAGCAACTACCCAGGATCGTCGAAGCCG CAGCACGTCCCTTGGCGCAAGTCGAGCGGGTGGTCGTGTTCGATTCCGGTGCCGCTGGAGACGGCACGAGCGCACTCGGG CGCTACGCGACGCAGCTCCCGGTCATCGTCCAGCAACTCGTCGAAGGGTTCAGCGCGGTGACCGGTGTCGACCTGACGAC CGCGGTGCGGGATCGGCTGGCAGCGACACCAGCTGCCGACGGTGCGGCGAGCGATCCACCGGGACCCGACCCTGCGAGCA CGACGTAG
Upstream 100 bases:
>100_bases AGTTGGTCCGTGTCTCCGGTTTGGCTGGAACCGTCCTTTTGGTCGAGCCCCTGCAGCAGGCGACTGCCGTCGAGGGTCGT GACGCGAGAGGAGAGTCTCG
Downstream 100 bases:
>100_bases CCAGTCGAGCGGCGCCGCATCGCTGCTCAGCCGTGAGATCGTGCGTCCCGGTCTGTCTCGTGCGTCACCCGTCACGCTCG CCCGAGCGCGCCATCCTCGT
Product: band 7 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 535; Mature: 535
Protein sequence:
>535_residues MNFPLPDVFQALFAILLVFLAFAALLAIVSRNIIKVPPNMVAVFSGRRRTIVDPTTGERRTVGYRLIKGGSSIRIPIVER VDFLSLNVMTIPLKIASAYTKEGVPVSVDAVANVKIGSDDQMLMNAIERFLGMEQDQIRSVIFQTLEGHLRSILGTLTVE QINADRQAFAQRLAAESAQDLSRMGIEIDVLTIQQISDPQGYLDALGQRRTAEVKRDAEVGKAEAERDARVRRAQALQQA AIAEAMAEAEIAAAQKEAEVRKARYEAEVQAERARAAQAGPLAEAEARRQVVVAEQQVELARTEAAIAVQETEARRREKE LEATVLKSAEAERRATIIRAEAEREATILRAEGERQAQVVRAEAEARERELVGTGEAARIRQIGQAEAEAKKALAEALQA ELFAQAEGQRAALLAEADGKRALADALNHYGPIAMQLLMYQAFVEQLPRIVEAAARPLAQVERVVVFDSGAAGDGTSALG RYATQLPVIVQQLVEGFSAVTGVDLTTAVRDRLAATPAADGAASDPPGPDPASTT
Sequences:
>Translated_535_residues MNFPLPDVFQALFAILLVFLAFAALLAIVSRNIIKVPPNMVAVFSGRRRTIVDPTTGERRTVGYRLIKGGSSIRIPIVER VDFLSLNVMTIPLKIASAYTKEGVPVSVDAVANVKIGSDDQMLMNAIERFLGMEQDQIRSVIFQTLEGHLRSILGTLTVE QINADRQAFAQRLAAESAQDLSRMGIEIDVLTIQQISDPQGYLDALGQRRTAEVKRDAEVGKAEAERDARVRRAQALQQA AIAEAMAEAEIAAAQKEAEVRKARYEAEVQAERARAAQAGPLAEAEARRQVVVAEQQVELARTEAAIAVQETEARRREKE LEATVLKSAEAERRATIIRAEAEREATILRAEGERQAQVVRAEAEARERELVGTGEAARIRQIGQAEAEAKKALAEALQA ELFAQAEGQRAALLAEADGKRALADALNHYGPIAMQLLMYQAFVEQLPRIVEAAARPLAQVERVVVFDSGAAGDGTSALG RYATQLPVIVQQLVEGFSAVTGVDLTTAVRDRLAATPAADGAASDPPGPDPASTT >Mature_535_residues MNFPLPDVFQALFAILLVFLAFAALLAIVSRNIIKVPPNMVAVFSGRRRTIVDPTTGERRTVGYRLIKGGSSIRIPIVER VDFLSLNVMTIPLKIASAYTKEGVPVSVDAVANVKIGSDDQMLMNAIERFLGMEQDQIRSVIFQTLEGHLRSILGTLTVE QINADRQAFAQRLAAESAQDLSRMGIEIDVLTIQQISDPQGYLDALGQRRTAEVKRDAEVGKAEAERDARVRRAQALQQA AIAEAMAEAEIAAAQKEAEVRKARYEAEVQAERARAAQAGPLAEAEARRQVVVAEQQVELARTEAAIAVQETEARRREKE LEATVLKSAEAERRATIIRAEAEREATILRAEGERQAQVVRAEAEARERELVGTGEAARIRQIGQAEAEAKKALAEALQA ELFAQAEGQRAALLAEADGKRALADALNHYGPIAMQLLMYQAFVEQLPRIVEAAARPLAQVERVVVFDSGAAGDGTSALG RYATQLPVIVQQLVEGFSAVTGVDLTTAVRDRLAATPAADGAASDPPGPDPASTT
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yqiK and Synechocystis PCC 6803 sll1021 [H]
Homologues:
Organism=Homo sapiens, GI5031699, Length=470, Percent_Identity=35.3191489361702, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI94538362, Length=475, Percent_Identity=36.2105263157895, Blast_Score=218, Evalue=1e-56, Organism=Escherichia coli, GI1789430, Length=524, Percent_Identity=24.8091603053435, Blast_Score=80, Evalue=3e-16, Organism=Drosophila melanogaster, GI17137546, Length=446, Percent_Identity=35.4260089686099, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24653894, Length=450, Percent_Identity=35.1111111111111, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI24642033, Length=475, Percent_Identity=34.1052631578947, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24642031, Length=475, Percent_Identity=34.1052631578947, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24642029, Length=488, Percent_Identity=33.1967213114754, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI24642027, Length=488, Percent_Identity=33.1967213114754, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI24642061, Length=387, Percent_Identity=34.3669250645995, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI281360882, Length=366, Percent_Identity=32.2404371584699, Blast_Score=132, Evalue=6e-31, Organism=Drosophila melanogaster, GI281360884, Length=323, Percent_Identity=31.2693498452012, Blast_Score=108, Evalue=9e-24, Organism=Drosophila melanogaster, GI24642065, Length=323, Percent_Identity=31.2693498452012, Blast_Score=108, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 57804; Mature: 57804
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFPLPDVFQALFAILLVFLAFAALLAIVSRNIIKVPPNMVAVFSGRRRTIVDPTTGERR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCEEECCCCCCCH TVGYRLIKGGSSIRIPIVERVDFLSLNVMTIPLKIASAYTKEGVPVSVDAVANVKIGSDD HHCCCEEECCCEEEEEHHHCCCEEEEEEEEEHHHHHHHHHCCCCCEEEEEEEEEEECCCH QMLMNAIERFLGMEQDQIRSVIFQTLEGHLRSILGTLTVEQINADRQAFAQRLAAESAQD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LSRMGIEIDVLTIQQISDPQGYLDALGQRRTAEVKRDAEVGKAEAERDARVRRAQALQQA HHHCCCEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH AIAEAMAEAEIAAAQKEAEVRKARYEAEVQAERARAAQAGPLAEAEARRQVVVAEQQVEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ARTEAAIAVQETEARRREKELEATVLKSAEAERRATIIRAEAEREATILRAEGERQAQVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCHHEEECCCCHHHHHH RAEAEARERELVGTGEAARIRQIGQAEAEAKKALAEALQAELFAQAEGQRAALLAEADGK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH RALADALNHYGPIAMQLLMYQAFVEQLPRIVEAAARPLAQVERVVVFDSGAAGDGTSALG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHH RYATQLPVIVQQLVEGFSAVTGVDLTTAVRDRLAATPAADGAASDPPGPDPASTT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNFPLPDVFQALFAILLVFLAFAALLAIVSRNIIKVPPNMVAVFSGRRRTIVDPTTGERR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCEEECCCCCCCH TVGYRLIKGGSSIRIPIVERVDFLSLNVMTIPLKIASAYTKEGVPVSVDAVANVKIGSDD HHCCCEEECCCEEEEEHHHCCCEEEEEEEEEHHHHHHHHHCCCCCEEEEEEEEEEECCCH QMLMNAIERFLGMEQDQIRSVIFQTLEGHLRSILGTLTVEQINADRQAFAQRLAAESAQD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LSRMGIEIDVLTIQQISDPQGYLDALGQRRTAEVKRDAEVGKAEAERDARVRRAQALQQA HHHCCCEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH AIAEAMAEAEIAAAQKEAEVRKARYEAEVQAERARAAQAGPLAEAEARRQVVVAEQQVEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ARTEAAIAVQETEARRREKELEATVLKSAEAERRATIIRAEAEREATILRAEGERQAQVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCHHEEECCCCHHHHHH RAEAEARERELVGTGEAARIRQIGQAEAEAKKALAEALQAELFAQAEGQRAALLAEADGK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCH RALADALNHYGPIAMQLLMYQAFVEQLPRIVEAAARPLAQVERVVVFDSGAAGDGTSALG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHH RYATQLPVIVQQLVEGFSAVTGVDLTTAVRDRLAATPAADGAASDPPGPDPASTT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]