Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635832

Identifier: 221635832

GI number: 221635832

Start: 412800

End: 413354

Strand: Reverse

Name: 221635832

Synonym: trd_A0426

Alternate gene names: NA

Gene position: 413354-412800 (Counterclockwise)

Preceding gene: 221635833

Following gene: 221635831

Centisome position: 45.04

GC content: 65.59

Gene sequence:

>555_bases
GTGAGCCTGCTCGCGATTACCTATCTCGTCATCGCACTGGTCGGTCTCGCCTTCCTGGCGCTCACTGTTCTCATCGGCGA
GATCGCGGACATCTTCGACGTCGGTGACGACGGCATCGGGCCCTTCAATGGCAAGGTGATCGCCGTCGCCCTCACTGCCT
TCGGTGCGACCGGGCTCCTCATGACGTTCTTCCGCGTACCGGTCCTCTGGGGTGCGCTCGCCGCTGCGGGCAGCGGTCTC
GCCTTCGGTCTGGCTGCGTGGCTGCTCGTCGCTCTCCTCTACCGGCAACAGGCGACCACCGAGTTCTCGCTCCAGGATCT
CCTCGGTCGCACCGGCGAAGTGACCGTCCCGATCGCGGCCGACCAGCCAGGCTACGTTGTGATCAGTGGCCCGACCGGCA
CTCGTCAGTATCTCGCCCGCAGCTCGCGTGGAATCCCGATCCCCGCTGGCCAGTTGGTCCGTGTCTCCGGTTTGGCTGGA
ACCGTCCTTTTGGTCGAGCCCCTGCAGCAGGCGACTGCCGTCGAGGGTCGTGACGCGAGAGGAGAGTCTCGATGA

Upstream 100 bases:

>100_bases
ACCATGCCGCTCATCAGTTGCTCGACCAGGTCGACCGTACCGTCCGCTTGACCGAGCGGGCACAGCCGGGCATACTTTTG
CCAATTCGGGAGAATACTCG

Downstream 100 bases:

>100_bases
ACTTCCCTCTCCCCGACGTCTTCCAGGCACTCTTCGCCATCCTGCTCGTCTTTCTCGCCTTCGCCGCACTCCTCGCGATC
GTCAGCCGTAACATCATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSLLAITYLVIALVGLAFLALTVLIGEIADIFDVGDDGIGPFNGKVIAVALTAFGATGLLMTFFRVPVLWGALAAAGSGL
AFGLAAWLLVALLYRQQATTEFSLQDLLGRTGEVTVPIAADQPGYVVISGPTGTRQYLARSSRGIPIPAGQLVRVSGLAG
TVLLVEPLQQATAVEGRDARGESR

Sequences:

>Translated_184_residues
MSLLAITYLVIALVGLAFLALTVLIGEIADIFDVGDDGIGPFNGKVIAVALTAFGATGLLMTFFRVPVLWGALAAAGSGL
AFGLAAWLLVALLYRQQATTEFSLQDLLGRTGEVTVPIAADQPGYVVISGPTGTRQYLARSSRGIPIPAGQLVRVSGLAG
TVLLVEPLQQATAVEGRDARGESR
>Mature_183_residues
SLLAITYLVIALVGLAFLALTVLIGEIADIFDVGDDGIGPFNGKVIAVALTAFGATGLLMTFFRVPVLWGALAAAGSGLA
FGLAAWLLVALLYRQQATTEFSLQDLLGRTGEVTVPIAADQPGYVVISGPTGTRQYLARSSRGIPIPAGQLVRVSGLAGT
VLLVEPLQQATAVEGRDARGESR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19038; Mature: 18907

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLAITYLVIALVGLAFLALTVLIGEIADIFDVGDDGIGPFNGKVIAVALTAFGATGLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHCHHHHH
MTFFRVPVLWGALAAAGSGLAFGLAAWLLVALLYRQQATTEFSLQDLLGRTGEVTVPIAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEC
DQPGYVVISGPTGTRQYLARSSRGIPIPAGQLVRVSGLAGTVLLVEPLQQATAVEGRDAR
CCCCEEEEECCCCHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC
GESR
CCCC
>Mature Secondary Structure 
SLLAITYLVIALVGLAFLALTVLIGEIADIFDVGDDGIGPFNGKVIAVALTAFGATGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHCHHHHH
MTFFRVPVLWGALAAAGSGLAFGLAAWLLVALLYRQQATTEFSLQDLLGRTGEVTVPIAA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEC
DQPGYVVISGPTGTRQYLARSSRGIPIPAGQLVRVSGLAGTVLLVEPLQQATAVEGRDAR
CCCCEEEEECCCCHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC
GESR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA