Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635791

Identifier: 221635791

GI number: 221635791

Start: 370258

End: 370674

Strand: Reverse

Name: 221635791

Synonym: trd_A0385

Alternate gene names: NA

Gene position: 370674-370258 (Counterclockwise)

Preceding gene: 221635792

Following gene: 221635787

Centisome position: 40.39

GC content: 63.79

Gene sequence:

>417_bases
ATGACGTCAGTTCGCCGGGCTTCGTATACACCACTCCGCTGCCCGCTCTGTGGCGGCGAACTCGAAGAGGTCGTCGTTCG
CCAGCTCGGGCGTGTGACCGCACGTTTGCCCTGGCAACTTCATGCCGGACGTTGCCCTGAGCACGGCTGGTTTCAGGCCG
AAGTCATCAGCCGGCCCCCTCGCGAAATTTTCCCCGTCAATCGCCCAGGTGGGATCGCCCGTCGCATCGTCTTGGAGGGC
AAGGAGATCTACGCGTTCCCGACGATCTGGAACCGGTTGGATACGCGGCAAGAAGTCGACCCCTTCGACACCCGCTACTG
GCAGATCGATTGGGAACGACTCGGTATTCGCCCTCCCACTCGTGCGGTCCAACCGGAACTGGTCGAGACGCTCGCGGGGA
GCCGCCGGCGTGCCTGA

Upstream 100 bases:

>100_bases
CATGCTCGCCGCCGCGGACCGAGCGACTGCATGCTATGATCGTGCCGGATCGCTCCGGGCCGGAGCGCTGAGCCGGGTCG
GTGTGAGGGAACGCTGAGCC

Downstream 100 bases:

>100_bases
ACTCCCCGAGGTCGAAGCGGCACGGCGCGGCATCGCCGAGCAGCTGCTCGGCCGCGTCTGTACGGGCTACGAACTGTATC
GCCCCCGACTCATCGTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTSVRRASYTPLRCPLCGGELEEVVVRQLGRVTARLPWQLHAGRCPEHGWFQAEVISRPPREIFPVNRPGGIARRIVLEG
KEIYAFPTIWNRLDTRQEVDPFDTRYWQIDWERLGIRPPTRAVQPELVETLAGSRRRA

Sequences:

>Translated_138_residues
MTSVRRASYTPLRCPLCGGELEEVVVRQLGRVTARLPWQLHAGRCPEHGWFQAEVISRPPREIFPVNRPGGIARRIVLEG
KEIYAFPTIWNRLDTRQEVDPFDTRYWQIDWERLGIRPPTRAVQPELVETLAGSRRRA
>Mature_137_residues
TSVRRASYTPLRCPLCGGELEEVVVRQLGRVTARLPWQLHAGRCPEHGWFQAEVISRPPREIFPVNRPGGIARRIVLEGK
EIYAFPTIWNRLDTRQEVDPFDTRYWQIDWERLGIRPPTRAVQPELVETLAGSRRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16028; Mature: 15896

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVRRASYTPLRCPLCGGELEEVVVRQLGRVTARLPWQLHAGRCPEHGWFQAEVISRPP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEHHHCCCC
REIFPVNRPGGIARRIVLEGKEIYAFPTIWNRLDTRQEVDPFDTRYWQIDWERLGIRPPT
HHHCCCCCCCCCEEEEEECCCEEEECHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCC
RAVQPELVETLAGSRRRA
CCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
TSVRRASYTPLRCPLCGGELEEVVVRQLGRVTARLPWQLHAGRCPEHGWFQAEVISRPP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEHHHCCCC
REIFPVNRPGGIARRIVLEGKEIYAFPTIWNRLDTRQEVDPFDTRYWQIDWERLGIRPPT
HHHCCCCCCCCCEEEEEECCCEEEECHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCCCC
RAVQPELVETLAGSRRRA
CCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA