Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

Click here to switch to the map view.

The map label for this gene is tauA [C]

Identifier: 221635737

GI number: 221635737

Start: 318824

End: 319936

Strand: Reverse

Name: tauA [C]

Synonym: trd_A0331

Alternate gene names: 221635737

Gene position: 319936-318824 (Counterclockwise)

Preceding gene: 221635738

Following gene: 221635736

Centisome position: 34.86

GC content: 59.12

Gene sequence:

>1113_bases
ATGAATCGCCGTACATTCGTCCGCACGGCTCTTCTGGGCACAGTGTCGTCATACCTTCTCGCTGCTTGTGGTGGCGGTGG
CAACCCCACACCCACGCCCCAAGCAGCAGCGCCTGCCCCCTCGCCGACACCGATGCCGATGGCCACTCCGACGCCAGCGC
CCGCTCCCACCGCGACACCGACGGTCGCGCCCACTCCGACACCCGCTCCGCCACCGACCCTCCGCTTCGCCTACCTCCGA
CTCGGCTGGGCAGGCTGCGAAGCGATCGACGAACTCAAACTTCTCAAGGAACGCGGCTGGAATATCGAGTGGTCACGCAT
CGACCAGATCAGTGCACTGGCCAACGCCTATGCTGCTGGCCAAGCGGAGATCATCGACATGTCCGCCATCATCGCAGCCC
AAATGCACGAAAAAGGTGTCGAGTTCAAGATCTTCAGCGCTGCAGTCGGAACGCTCGGTGCCATTCTCGTGCGCGCCGAC
CTCAACGACATCAGCAGTGTTCCAGACCTCCGTGGGCGAAAGGTCGCGGGTGTCCCCGGCGGCACGACAACGCAAGACAT
CAATGCAATGGTCCGTAAACTGTACAATATGGATCTCTTTACCGACACACAATTCGTTCAGGCTTCTGCACCGCCCGACG
TCGCCAATCTGATCATCAACAAGAATGTCGATGCCGTGCTCATCTGGGAGCCCACGACTTCACGGCTCACCGAGAGTGGA
GTCGCCAAGATCCTCGTCACCCAACAAGAGCTGTGGAAGCAGGTATCCGGATCGCCGAATCCGCAAGTTCATGTCGTCTA
CCTTGCCCGGCCCGATCTTCTGGAGAAGTACCCGAAACTCGCCAAGGACATCATCGAAGCGCAGCAGACCGTCGCTGACA
TGTGGAAGAAGCAAGACGAAAAGGTCATCCAGGCTTTCGCCACGGTAACCCAGTTACCGCCCGATATCGTGAAGGTCGCG
TTGTCGCGAACGACTCCTCTCGCTGGACTCGGCAAGGATCTTCAGGAAACACTGCTCGCACAGTGGCGCTTCAATCGTGA
ATCAGGCGTGCTTCTGCAGTCTGACATATGGCTCGATCCAGAGAAAGCACGCAAGCTCTTCTGGACAGAGTGA

Upstream 100 bases:

>100_bases
GTACATGACGGCTTTGTAATGCATACCGAAGTGAAGAAGGCTTCCGCGCACTGTCGATCGAGCTGGAAAGTTACCTCAGA
CTGAGAGGAGGAGACCCGAG

Downstream 100 bases:

>100_bases
TTTCGGGGAGGCCTGGATGAACCCGACTCTCCTCTCCTCGATAGTCGATCATGCGGCCGAAAGCGATCCCGCGCGGCCCT
TCCTCCAGTGGCACCAGGCT

Product: ABC transporter, quaternary amine uptake transporter (QAT) family, substrate-binding protein

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MNRRTFVRTALLGTVSSYLLAACGGGGNPTPTPQAAAPAPSPTPMPMATPTPAPAPTATPTVAPTPTPAPPPTLRFAYLR
LGWAGCEAIDELKLLKERGWNIEWSRIDQISALANAYAAGQAEIIDMSAIIAAQMHEKGVEFKIFSAAVGTLGAILVRAD
LNDISSVPDLRGRKVAGVPGGTTTQDINAMVRKLYNMDLFTDTQFVQASAPPDVANLIINKNVDAVLIWEPTTSRLTESG
VAKILVTQQELWKQVSGSPNPQVHVVYLARPDLLEKYPKLAKDIIEAQQTVADMWKKQDEKVIQAFATVTQLPPDIVKVA
LSRTTPLAGLGKDLQETLLAQWRFNRESGVLLQSDIWLDPEKARKLFWTE

Sequences:

>Translated_370_residues
MNRRTFVRTALLGTVSSYLLAACGGGGNPTPTPQAAAPAPSPTPMPMATPTPAPAPTATPTVAPTPTPAPPPTLRFAYLR
LGWAGCEAIDELKLLKERGWNIEWSRIDQISALANAYAAGQAEIIDMSAIIAAQMHEKGVEFKIFSAAVGTLGAILVRAD
LNDISSVPDLRGRKVAGVPGGTTTQDINAMVRKLYNMDLFTDTQFVQASAPPDVANLIINKNVDAVLIWEPTTSRLTESG
VAKILVTQQELWKQVSGSPNPQVHVVYLARPDLLEKYPKLAKDIIEAQQTVADMWKKQDEKVIQAFATVTQLPPDIVKVA
LSRTTPLAGLGKDLQETLLAQWRFNRESGVLLQSDIWLDPEKARKLFWTE
>Mature_370_residues
MNRRTFVRTALLGTVSSYLLAACGGGGNPTPTPQAAAPAPSPTPMPMATPTPAPAPTATPTVAPTPTPAPPPTLRFAYLR
LGWAGCEAIDELKLLKERGWNIEWSRIDQISALANAYAAGQAEIIDMSAIIAAQMHEKGVEFKIFSAAVGTLGAILVRAD
LNDISSVPDLRGRKVAGVPGGTTTQDINAMVRKLYNMDLFTDTQFVQASAPPDVANLIINKNVDAVLIWEPTTSRLTESG
VAKILVTQQELWKQVSGSPNPQVHVVYLARPDLLEKYPKLAKDIIEAQQTVADMWKKQDEKVIQAFATVTQLPPDIVKVA
LSRTTPLAGLGKDLQETLLAQWRFNRESGVLLQSDIWLDPEKARKLFWTE

Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. [C]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40135; Mature: 40135

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRTFVRTALLGTVSSYLLAACGGGGNPTPTPQAAAPAPSPTPMPMATPTPAPAPTATP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TVAPTPTPAPPPTLRFAYLRLGWAGCEAIDELKLLKERGWNIEWSRIDQISALANAYAAG
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
QAEIIDMSAIIAAQMHEKGVEFKIFSAAVGTLGAILVRADLNDISSVPDLRGRKVAGVPG
CCCEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHEECCHHHHHCCCCCCCCEEECCCC
GTTTQDINAMVRKLYNMDLFTDTQFVQASAPPDVANLIINKNVDAVLIWEPTTSRLTESG
CCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHEECCCCCEEEEECCCHHHHHHHC
VAKILVTQQELWKQVSGSPNPQVHVVYLARPDLLEKYPKLAKDIIEAQQTVADMWKKQDE
HHHEEECHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIQAFATVTQLPPDIVKVALSRTTPLAGLGKDLQETLLAQWRFNRESGVLLQSDIWLDP
HHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCCH
EKARKLFWTE
HHHHHHCCCC
>Mature Secondary Structure
MNRRTFVRTALLGTVSSYLLAACGGGGNPTPTPQAAAPAPSPTPMPMATPTPAPAPTATP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TVAPTPTPAPPPTLRFAYLRLGWAGCEAIDELKLLKERGWNIEWSRIDQISALANAYAAG
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
QAEIIDMSAIIAAQMHEKGVEFKIFSAAVGTLGAILVRADLNDISSVPDLRGRKVAGVPG
CCCEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHEECCHHHHHCCCCCCCCEEECCCC
GTTTQDINAMVRKLYNMDLFTDTQFVQASAPPDVANLIINKNVDAVLIWEPTTSRLTESG
CCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHEECCCCCEEEEECCCHHHHHHHC
VAKILVTQQELWKQVSGSPNPQVHVVYLARPDLLEKYPKLAKDIIEAQQTVADMWKKQDE
HHHEEECHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIQAFATVTQLPPDIVKVALSRTTPLAGLGKDLQETLLAQWRFNRESGVLLQSDIWLDP
HHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCCH
EKARKLFWTE
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA