Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is dmpB [H]

Identifier: 221635733

GI number: 221635733

Start: 313789

End: 314685

Strand: Reverse

Name: dmpB [H]

Synonym: trd_A0327

Alternate gene names: 221635733

Gene position: 314685-313789 (Counterclockwise)

Preceding gene: 221635734

Following gene: 221635732

Centisome position: 34.29

GC content: 56.86

Gene sequence:

>897_bases
ATGGCCCTGTGGTTGACCCATGTCGGCGTTCGCGTGCCGAATCTGCAGGACTCCATCGAGTTTCACACGTCCGTGCTGGG
TCTCACGGTACTGTCGCGAGAAAGCGACAGAGCATATCTCAGCTGCGGATACGATCGCTCTGTTGACCTTTGTCTCGTTA
CCGGCGGCACGGGTCTCGATCATGTCGCTTTTGGCGTCACCGACGAACGCGAACTGGACACCCTCGCTTCTCGACTCCTC
GACCACGGAGCCGAACTCGTTCCATCTGCCTCTCCAGAGCCTGGGGTGAACAAGGCGACGCGACTCCGCCTCCCCTCAGG
CCATCTCCTCGAGTTCGTCATCATAGAACCCGATCCAGAACAACGATTCACCTATCCGCACCCTGCAGCACCACCCATGA
CCCATCGTTCGGTAGTTCTCTTGATCGATTTGGATCATGTAACACTCCGGCACACGGATGTATCAGGCTTGGCGCTCTTT
CTCCAGAATAGCCTCGGTTTTCACATCCCTGATGCACGCTTGATGCCAGATGGGCAGTGGCGCGCCGCGTGGCTTCATGT
GACATCCCAGCACCACGATCTCGCCATCATTCGGGGAGACGCTGGTGAAACACTCGACCATGTTGCCTTCCGCGTCAGCG
GAATCGAGACCATGAAGTATCTGGCTGATCGCCTAGCTTCCTTCGGCATGACGATCGAAGTTGGACCAGGTCGTCACAGC
ATCGGCGGGAACCTCTTTACCTACTTTTGGACTCCAGACGGTAACCGTTATGAGCTTTCTGCAGAAATGGCGATGGTTTC
GAACACTGCCTCACCCACTCGTTTTTGGGGCGATGATCCCGGGCTCTTTTCCCCTTGGGGCATCCGTCCTCCTGAGTCGT
TCCGGAAAGGATCATGA

Upstream 100 bases:

>100_bases
TGCTGGATGCCAAGGTCAACCCAGCGGTACGCGGCGGAGAATGGTTCGATCTGGCTTTCGAGGGTCACTAACTCGGTGTT
CTGTTTGGAAAGGAGGACAC

Downstream 100 bases:

>100_bases
GAATGGATGTCATATCTCACAGCGCTACGCACGACGTCTTCGACACGACGATCATCGGCGGGGGGCCGGTCGGGTTGTTT
GCCGCCTTCTACGCCGGCAT

Product: catechol 2,3-dioxygenase

Products: NA

Alternate protein names: MPC; CatO2ase; Catechol 2,3-dioxygenase; C23O [H]

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MALWLTHVGVRVPNLQDSIEFHTSVLGLTVLSRESDRAYLSCGYDRSVDLCLVTGGTGLDHVAFGVTDERELDTLASRLL
DHGAELVPSASPEPGVNKATRLRLPSGHLLEFVIIEPDPEQRFTYPHPAAPPMTHRSVVLLIDLDHVTLRHTDVSGLALF
LQNSLGFHIPDARLMPDGQWRAAWLHVTSQHHDLAIIRGDAGETLDHVAFRVSGIETMKYLADRLASFGMTIEVGPGRHS
IGGNLFTYFWTPDGNRYELSAEMAMVSNTASPTRFWGDDPGLFSPWGIRPPESFRKGS

Sequences:

>Translated_298_residues
MALWLTHVGVRVPNLQDSIEFHTSVLGLTVLSRESDRAYLSCGYDRSVDLCLVTGGTGLDHVAFGVTDERELDTLASRLL
DHGAELVPSASPEPGVNKATRLRLPSGHLLEFVIIEPDPEQRFTYPHPAAPPMTHRSVVLLIDLDHVTLRHTDVSGLALF
LQNSLGFHIPDARLMPDGQWRAAWLHVTSQHHDLAIIRGDAGETLDHVAFRVSGIETMKYLADRLASFGMTIEVGPGRHS
IGGNLFTYFWTPDGNRYELSAEMAMVSNTASPTRFWGDDPGLFSPWGIRPPESFRKGS
>Mature_297_residues
ALWLTHVGVRVPNLQDSIEFHTSVLGLTVLSRESDRAYLSCGYDRSVDLCLVTGGTGLDHVAFGVTDERELDTLASRLLD
HGAELVPSASPEPGVNKATRLRLPSGHLLEFVIIEPDPEQRFTYPHPAAPPMTHRSVVLLIDLDHVTLRHTDVSGLALFL
QNSLGFHIPDARLMPDGQWRAAWLHVTSQHHDLAIIRGDAGETLDHVAFRVSGIETMKYLADRLASFGMTIEVGPGRHSI
GGNLFTYFWTPDGNRYELSAEMAMVSNTASPTRFWGDDPGLFSPWGIRPPESFRKGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017624
- InterPro:   IPR004360
- InterPro:   IPR000486 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: =1.13.11.2 [H]

Molecular weight: Translated: 32897; Mature: 32765

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALWLTHVGVRVPNLQDSIEFHTSVLGLTVLSRESDRAYLSCGYDRSVDLCLVTGGTGLD
CEEEEEECCEECCCCHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCC
HVAFGVTDERELDTLASRLLDHGAELVPSASPEPGVNKATRLRLPSGHLLEFVIIEPDPE
CEEECCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCC
QRFTYPHPAAPPMTHRSVVLLIDLDHVTLRHTDVSGLALFLQNSLGFHIPDARLMPDGQW
CCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCHHHHEEEECCCCCCCCCCCEECCCCCE
RAAWLHVTSQHHDLAIIRGDAGETLDHVAFRVSGIETMKYLADRLASFGMTIEVGPGRHS
EEEEEEEECCCCEEEEEECCCCCCHHHHHEECCCHHHHHHHHHHHHHCCCEEEECCCCCC
IGGNLFTYFWTPDGNRYELSAEMAMVSNTASPTRFWGDDPGLFSPWGIRPPESFRKGS
CCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCHHHCCCC
>Mature Secondary Structure 
ALWLTHVGVRVPNLQDSIEFHTSVLGLTVLSRESDRAYLSCGYDRSVDLCLVTGGTGLD
EEEEEECCEECCCCHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCC
HVAFGVTDERELDTLASRLLDHGAELVPSASPEPGVNKATRLRLPSGHLLEFVIIEPDPE
CEEECCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCC
QRFTYPHPAAPPMTHRSVVLLIDLDHVTLRHTDVSGLALFLQNSLGFHIPDARLMPDGQW
CCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCHHHHEEEECCCCCCCCCCCEECCCCCE
RAAWLHVTSQHHDLAIIRGDAGETLDHVAFRVSGIETMKYLADRLASFGMTIEVGPGRHS
EEEEEEEECCCCEEEEEECCCCCCHHHHHEECCCHHHHHHHHHHHHHCCCEEEECCCCCC
IGGNLFTYFWTPDGNRYELSAEMAMVSNTASPTRFWGDDPGLFSPWGIRPPESFRKGS
CCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2620833; 2194577 [H]