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The map label for this gene is oppC [H]

Identifier: 221635730

GI number: 221635730

Start: 310544

End: 311470

Strand: Reverse

Name: oppC [H]

Synonym: trd_A0324

Alternate gene names: 221635730

Gene position: 311470-310544 (Counterclockwise)

Preceding gene: 221635731

Following gene: 221635729

Centisome position: 33.94

GC content: 63.65

Gene sequence:

>927_bases
ATGGCCACCACCGGTGCTGGGATGACCGGTCGAGCAGAGCGGGCCGATGCCCTCATTTGGGCAGCTCGCCCTCACCGGAC
GCTCTGGCGCGATGCCCTCAGTCGCTTGCTCGCCAACCGCCTCGCCTTGTTCGGGCTCATCATGGTCACCACCTTCACCC
TCATGGCGATCTTCGCACCTGTGCTCGCTCCGTACCCATACGACAAAGCCGATTTTTCGGCCGTCTCCCGGTTTCCGACT
TGGACCGGGAAGTACCCGCTCGGCACCGATCTCGTCGGTCGCGACATGCTCAGTCGCCTCATCTGGGGTGCGCAGGTCTC
CATGCTCGTCGGACTCGGCGCGCAGGTCATCGTCTTCTTGATCGGTGTGCCCATCGGCGCGCTGGCTGGCTACCTCGGTG
GCCGCGTCGACGCGATCCTGATGCGCTTTGTTGACGTGATGTACGCCTTCCCCCAGCTCCTCTTCGTCATCCTGATCATG
GCGGCGCTCGGACGCGGGATGCAGAACATCTTCATCGCGATCGGTGTGACTGGCTGGGTCACGCTCGCTCGTCTTACCCG
CGCCGAGTTCTTGGCGCTGCGCGAGCGCGATTTCGTCATCGCTGCGCGCGCAGCTGGCGCTTCTCCCTGGCGCATCATCA
CGCGGCATCTTCTGCCGAACGCCCTCTCGCCGATCATCGTGACGCTGACCTTCGGCATTCCCCAGGCCATCTTCACCGAA
GCAGCGCTCAGCTTCATCGGGATCGGCATTCCCGAACCGCGCCCGAGCTGGGGGAAGATGGCTGGCGAGACGCAGCAGTA
CATCACTTCGTACTGGTACATGCCGATCTTCCCGACCATCCTGATCGCGCTTTTGATGCTCAGTTTCACCTTCCTCGGCG
ACGGGCTGCGCGACGCGCTCGATCCACGGACTCGCAAACGCGACTGA

Upstream 100 bases:

>100_bases
GTTCCTCGCCATCATGAATATTGTCGTCGATATCTTGTACGGTGTCGTCGATCCTCGTATCCGCCTGGCTTGAGCCGAAA
CGCGGAGAGGAGCTCACCGC

Downstream 100 bases:

>100_bases
AAGGAGGTGTGCACGATCGGAAACCATGGACACTCGTTTCGAGTCGAGGAGTCGTCTCGTGATCCAAGAGGAGGAGGTAC
GATGAGCGACAAACTCCGCT

Product: oligopeptide transport system permease protein OppC

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MATTGAGMTGRAERADALIWAARPHRTLWRDALSRLLANRLALFGLIMVTTFTLMAIFAPVLAPYPYDKADFSAVSRFPT
WTGKYPLGTDLVGRDMLSRLIWGAQVSMLVGLGAQVIVFLIGVPIGALAGYLGGRVDAILMRFVDVMYAFPQLLFVILIM
AALGRGMQNIFIAIGVTGWVTLARLTRAEFLALRERDFVIAARAAGASPWRIITRHLLPNALSPIIVTLTFGIPQAIFTE
AALSFIGIGIPEPRPSWGKMAGETQQYITSYWYMPIFPTILIALLMLSFTFLGDGLRDALDPRTRKRD

Sequences:

>Translated_308_residues
MATTGAGMTGRAERADALIWAARPHRTLWRDALSRLLANRLALFGLIMVTTFTLMAIFAPVLAPYPYDKADFSAVSRFPT
WTGKYPLGTDLVGRDMLSRLIWGAQVSMLVGLGAQVIVFLIGVPIGALAGYLGGRVDAILMRFVDVMYAFPQLLFVILIM
AALGRGMQNIFIAIGVTGWVTLARLTRAEFLALRERDFVIAARAAGASPWRIITRHLLPNALSPIIVTLTFGIPQAIFTE
AALSFIGIGIPEPRPSWGKMAGETQQYITSYWYMPIFPTILIALLMLSFTFLGDGLRDALDPRTRKRD
>Mature_307_residues
ATTGAGMTGRAERADALIWAARPHRTLWRDALSRLLANRLALFGLIMVTTFTLMAIFAPVLAPYPYDKADFSAVSRFPTW
TGKYPLGTDLVGRDMLSRLIWGAQVSMLVGLGAQVIVFLIGVPIGALAGYLGGRVDAILMRFVDVMYAFPQLLFVILIMA
ALGRGMQNIFIAIGVTGWVTLARLTRAEFLALRERDFVIAARAAGASPWRIITRHLLPNALSPIIVTLTFGIPQAIFTEA
ALSFIGIGIPEPRPSWGKMAGETQQYITSYWYMPIFPTILIALLMLSFTFLGDGLRDALDPRTRKRD

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=280, Percent_Identity=37.1428571428571, Blast_Score=195, Evalue=3e-51,
Organism=Escherichia coli, GI1787054, Length=281, Percent_Identity=37.3665480427046, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1787760, Length=262, Percent_Identity=37.7862595419847, Blast_Score=178, Evalue=5e-46,
Organism=Escherichia coli, GI1789964, Length=257, Percent_Identity=41.6342412451362, Blast_Score=164, Evalue=8e-42,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=34.4398340248963, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1788505, Length=234, Percent_Identity=34.1880341880342, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1787549, Length=293, Percent_Identity=29.6928327645051, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33880; Mature: 33749

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTGAGMTGRAERADALIWAARPHRTLWRDALSRLLANRLALFGLIMVTTFTLMAIFAP
CCCCCCCCCCCHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAPYPYDKADFSAVSRFPTWTGKYPLGTDLVGRDMLSRLIWGAQVSMLVGLGAQVIVFL
HHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGVPIGALAGYLGGRVDAILMRFVDVMYAFPQLLFVILIMAALGRGMQNIFIAIGVTGWV
HHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TLARLTRAEFLALRERDFVIAARAAGASPWRIITRHLLPNALSPIIVTLTFGIPQAIFTE
HHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AALSFIGIGIPEPRPSWGKMAGETQQYITSYWYMPIFPTILIALLMLSFTFLGDGLRDAL
HHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
DPRTRKRD
CCCCCCCC
>Mature Secondary Structure 
ATTGAGMTGRAERADALIWAARPHRTLWRDALSRLLANRLALFGLIMVTTFTLMAIFAP
CCCCCCCCCCHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]