| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635724
Identifier: 221635724
GI number: 221635724
Start: 304158
End: 305006
Strand: Reverse
Name: 221635724
Synonym: trd_A0318
Alternate gene names: NA
Gene position: 305006-304158 (Counterclockwise)
Preceding gene: 221635725
Following gene: 221635723
Centisome position: 33.23
GC content: 66.2
Gene sequence:
>849_bases ATGATGCGAGAGTCGCGGTCGATCGTCCAGATCGTCAACGCCGAACGGATCGTCGTCCTGGGGTGGGGTCGAGCGATCCT CGCCCAACTCGCTCATCCTCTCGTCGCAGCGGGGGTCGCCGAGCATTCGTCGTTCGCCCGCGATACCTGGTCAGCCTTCC GACGCTTTCGCGCAACGGTGAACGCGATGCGCGCCCTCACCTTCGGCTCCCCCGAGGCAGCCCGAGCAGCCGCTGCCCGC ATCATCCGCACTCACGACCGCGTACGAGGCATGCTCCGGGAGCCGAGCGGTCGCTTTCCAGCCGGTACCCGGTACAGCGC GCACGATCCTGATCTCCTCGTCTGGGTGCACACCACGACCGTCGAAGCGACGATCACGGCATACGAGCGTTTCGTCCGCG TGCTCACCCCGGAGGAGCGAGACCGCTATTGTCGTGAAGCGAGCGCGATGGAGTTTTGGCTGGGCATACCCAATGGGTAC CTTCCTCGCTCCTGGGGGGAGATCGAGGAAAAGATCACCCGAGCACGCCGGGAGGGGACACTCGCCGTCACACCGCTCAC GCGACAACTCGCCGACTCCGTCCTTTCCCCACCGCATCCCTGGTGGCTCGCCCCGAGCGTCCGCGTCTGGCGTTGGCTGA CCATCGGTTTTCTGCCCGACTGGCTCCGCGCGGCCTATGGCTTCAGCTGGTCAGCTCATGACGATGAGCGGTTCGAGCGC TACGCTCGTGCGATCCGCTCGCTCTGGTCGCGACTTCCCGCGCTCGTCCGCACCTGGCCAGAAGCACGGTCTGCCCAGTC ACTCGCCCTTCCCCCAGATGGCATGACGAGCGTGGGAGCACCGCAGTGA
Upstream 100 bases:
>100_bases CGTACCGACTCTGGTCATCGCGGCTGTTGCTCGTCGCTCGCACGGCCAGCGAGCCATCCCAGCCCCTGGTGGTCGGGAGC GATTCGGAGAGTTCGTCCGC
Downstream 100 bases:
>100_bases GGGGCTTCTTCGCTTTTGTCCGCCGCTTCGGCGTTCCCTTCGGTCTGCTCGCTCTGAGTGTCGCGATCGCTGGCGCGACA CTGGCGCGCTACGCAGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MMRESRSIVQIVNAERIVVLGWGRAILAQLAHPLVAAGVAEHSSFARDTWSAFRRFRATVNAMRALTFGSPEAARAAAAR IIRTHDRVRGMLREPSGRFPAGTRYSAHDPDLLVWVHTTTVEATITAYERFVRVLTPEERDRYCREASAMEFWLGIPNGY LPRSWGEIEEKITRARREGTLAVTPLTRQLADSVLSPPHPWWLAPSVRVWRWLTIGFLPDWLRAAYGFSWSAHDDERFER YARAIRSLWSRLPALVRTWPEARSAQSLALPPDGMTSVGAPQ
Sequences:
>Translated_282_residues MMRESRSIVQIVNAERIVVLGWGRAILAQLAHPLVAAGVAEHSSFARDTWSAFRRFRATVNAMRALTFGSPEAARAAAAR IIRTHDRVRGMLREPSGRFPAGTRYSAHDPDLLVWVHTTTVEATITAYERFVRVLTPEERDRYCREASAMEFWLGIPNGY LPRSWGEIEEKITRARREGTLAVTPLTRQLADSVLSPPHPWWLAPSVRVWRWLTIGFLPDWLRAAYGFSWSAHDDERFER YARAIRSLWSRLPALVRTWPEARSAQSLALPPDGMTSVGAPQ >Mature_282_residues MMRESRSIVQIVNAERIVVLGWGRAILAQLAHPLVAAGVAEHSSFARDTWSAFRRFRATVNAMRALTFGSPEAARAAAAR IIRTHDRVRGMLREPSGRFPAGTRYSAHDPDLLVWVHTTTVEATITAYERFVRVLTPEERDRYCREASAMEFWLGIPNGY LPRSWGEIEEKITRARREGTLAVTPLTRQLADSVLSPPHPWWLAPSVRVWRWLTIGFLPDWLRAAYGFSWSAHDDERFER YARAIRSLWSRLPALVRTWPEARSAQSLALPPDGMTSVGAPQ
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32026; Mature: 32026
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRESRSIVQIVNAERIVVLGWGRAILAQLAHPLVAAGVAEHSSFARDTWSAFRRFRATV CCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAMRALTFGSPEAARAAAARIIRTHDRVRGMLREPSGRFPAGTRYSAHDPDLLVWVHTTT HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECH VEATITAYERFVRVLTPEERDRYCREASAMEFWLGIPNGYLPRSWGEIEEKITRARREGT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCC LAVTPLTRQLADSVLSPPHPWWLAPSVRVWRWLTIGFLPDWLRAAYGFSWSAHDDERFER EEECHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH YARAIRSLWSRLPALVRTWPEARSAQSLALPPDGMTSVGAPQ HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMRESRSIVQIVNAERIVVLGWGRAILAQLAHPLVAAGVAEHSSFARDTWSAFRRFRATV CCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAMRALTFGSPEAARAAAARIIRTHDRVRGMLREPSGRFPAGTRYSAHDPDLLVWVHTTT HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECH VEATITAYERFVRVLTPEERDRYCREASAMEFWLGIPNGYLPRSWGEIEEKITRARREGT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCC LAVTPLTRQLADSVLSPPHPWWLAPSVRVWRWLTIGFLPDWLRAAYGFSWSAHDDERFER EEECHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH YARAIRSLWSRLPALVRTWPEARSAQSLALPPDGMTSVGAPQ HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA