Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635631

Identifier: 221635631

GI number: 221635631

Start: 213722

End: 214555

Strand: Reverse

Name: 221635631

Synonym: trd_A0225

Alternate gene names: NA

Gene position: 214555-213722 (Counterclockwise)

Preceding gene: 221635635

Following gene: 221635630

Centisome position: 23.38

GC content: 68.11

Gene sequence:

>834_bases
ATGGACGAGGAGCCGCGCCTGACCGAACCTGCTCCGCCCGACCGACCGCTCGTCTACTCGGGCGAGCCAGCCGGCGACAG
TGGCGGCTTTCCCTGGCGGTGGGTCCTGATCGGTTGTGGCGGTGCACTCGTCCTGGCCTGTGTCTGCCTGGTCGCCGCCG
TCGGAACCTACGCGTTCCTCACGGTCACCCGCGCGACACCGACGCCCCAGATCGCCATGAGCACGCCCGCTGCTCGGCCA
GCCCGCACCGCGACGGTCGGATCCGGCTCGCTCACCCCGGCAACTGCGGTCCAGCCCGCGCCGCGGGGCACGCCGTCCTC
CAGCACCGGTCAGTCGAGCGCTGGGCTGCCTGCTGGTTGGCGGTGGTTCGACGACCCCTCCGGCCAGGTGCGCCTAGCGG
TTCCCGGTGGCTGGAACTTCTTTTATGAAGAAAAGATCTGTTGCAACGTCACGCTCGTGACGTTCGATCCCGGCCAACTG
CCGAGCGGACGGATCGCCTGGGCTCCGCCCGGATCGGGTGCCGCACACGAGGTACCGGCCGGGGAAATGGTCGTCGATCT
CTTCATCGTCGCGCCCCCCTACGCCGACCAGCCACCCGACTTCGGTCGCCCGCCCGATGGTGAAGACATCGTCGGCGGGC
GCTACCACGCGCAGCTCTACTTCAGCGCCCCCTATACCGACTGGCCCAGCGGGCAGGTCATCACCTATCTCTACCAGGAC
GACCGGGGTCGGCAGTGGTGCCTGATCGCCTATTTCGGCACGCCGTTCGAGCAAGATATGGAGCACTTGGCCATGCTCGG
CCAGATCGTTGCCAGCATCCAGCACCCGAGCTGA

Upstream 100 bases:

>100_bases
GACGCCCTCTCTTCGGTGCGCTGGTTCACGCTCGCACCGGTAGGCTCGCGCAGCAAGAAGCCGACCCGCACGGCAGGAGA
ACCCGCTAAGGGGGTGGACG

Downstream 100 bases:

>100_bases
GCGAGGAGAGCACGCCATGGAGCGTCGCCGTTCCCCAGTACAGTTGATCGGCTTCGGTTGCCTCGGTCTCCTGCTCCTCG
TCCTCGCAGTGGGCGGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MDEEPRLTEPAPPDRPLVYSGEPAGDSGGFPWRWVLIGCGGALVLACVCLVAAVGTYAFLTVTRATPTPQIAMSTPAARP
ARTATVGSGSLTPATAVQPAPRGTPSSSTGQSSAGLPAGWRWFDDPSGQVRLAVPGGWNFFYEEKICCNVTLVTFDPGQL
PSGRIAWAPPGSGAAHEVPAGEMVVDLFIVAPPYADQPPDFGRPPDGEDIVGGRYHAQLYFSAPYTDWPSGQVITYLYQD
DRGRQWCLIAYFGTPFEQDMEHLAMLGQIVASIQHPS

Sequences:

>Translated_277_residues
MDEEPRLTEPAPPDRPLVYSGEPAGDSGGFPWRWVLIGCGGALVLACVCLVAAVGTYAFLTVTRATPTPQIAMSTPAARP
ARTATVGSGSLTPATAVQPAPRGTPSSSTGQSSAGLPAGWRWFDDPSGQVRLAVPGGWNFFYEEKICCNVTLVTFDPGQL
PSGRIAWAPPGSGAAHEVPAGEMVVDLFIVAPPYADQPPDFGRPPDGEDIVGGRYHAQLYFSAPYTDWPSGQVITYLYQD
DRGRQWCLIAYFGTPFEQDMEHLAMLGQIVASIQHPS
>Mature_277_residues
MDEEPRLTEPAPPDRPLVYSGEPAGDSGGFPWRWVLIGCGGALVLACVCLVAAVGTYAFLTVTRATPTPQIAMSTPAARP
ARTATVGSGSLTPATAVQPAPRGTPSSSTGQSSAGLPAGWRWFDDPSGQVRLAVPGGWNFFYEEKICCNVTLVTFDPGQL
PSGRIAWAPPGSGAAHEVPAGEMVVDLFIVAPPYADQPPDFGRPPDGEDIVGGRYHAQLYFSAPYTDWPSGQVITYLYQD
DRGRQWCLIAYFGTPFEQDMEHLAMLGQIVASIQHPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29508; Mature: 29508

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEEPRLTEPAPPDRPLVYSGEPAGDSGGFPWRWVLIGCGGALVLACVCLVAAVGTYAFL
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCEEEE
TVTRATPTPQIAMSTPAARPARTATVGSGSLTPATAVQPAPRGTPSSSTGQSSAGLPAGW
EEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RWFDDPSGQVRLAVPGGWNFFYEEKICCNVTLVTFDPGQLPSGRIAWAPPGSGAAHEVPA
EECCCCCCCEEEEECCCCCEEECCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC
GEMVVDLFIVAPPYADQPPDFGRPPDGEDIVGGRYHAQLYFSAPYTDWPSGQVITYLYQD
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEC
DRGRQWCLIAYFGTPFEQDMEHLAMLGQIVASIQHPS
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDEEPRLTEPAPPDRPLVYSGEPAGDSGGFPWRWVLIGCGGALVLACVCLVAAVGTYAFL
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCEEEE
TVTRATPTPQIAMSTPAARPARTATVGSGSLTPATAVQPAPRGTPSSSTGQSSAGLPAGW
EEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RWFDDPSGQVRLAVPGGWNFFYEEKICCNVTLVTFDPGQLPSGRIAWAPPGSGAAHEVPA
EECCCCCCCEEEEECCCCCEEECCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC
GEMVVDLFIVAPPYADQPPDFGRPPDGEDIVGGRYHAQLYFSAPYTDWPSGQVITYLYQD
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEC
DRGRQWCLIAYFGTPFEQDMEHLAMLGQIVASIQHPS
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA