Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635560

Identifier: 221635560

GI number: 221635560

Start: 143695

End: 143988

Strand: Reverse

Name: 221635560

Synonym: trd_A0154

Alternate gene names: NA

Gene position: 143988-143695 (Counterclockwise)

Preceding gene: 221635561

Following gene: 221635559

Centisome position: 15.69

GC content: 67.69

Gene sequence:

>294_bases
ATGCTGTCTCGCCCCCGAGCTGCACCGCCGAGGAGAGGTGTTCCTGAGGAACGGAGAACAGCGAGAGCCAGCGGCTGTTC
CCGCGCTGCTCGAGCCGGGCCAGGAGCGCCAGCTGGCCACGCCCCCGCTCTCGCGCGCACTGCTGCCACAGCCGATCGCA
CCCGACCGTACCGGCGCGGCGGGATCGAACGTCGGCTCGCCATTCCGGCACCTACGGTGCGCTGTGTCGCCGTAACAGCG
GAGTCGAGAAAACCCTGGCACACTGCACGAGGCAGAATTGGCACACTTATCTGA

Upstream 100 bases:

>100_bases
ATGTTCTCCCAGCGGTCGTGCCGGACGCCGCGCTCGTCCTGAGCTGGTCCGCGCTGGCCGTCGCACTCGCGCACGCGCTC
GGCATCCGCCTCCGGCCCTG

Downstream 100 bases:

>100_bases
GTGGCGGGCATCACCGCCGCGTTCGTCGAAGTGCAACGGGTAAACTTTAGAAGCGAACATATTGCGTCGGAGAAACACAT
AAAGGAGAGGATCATGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MLSRPRAAPPRRGVPEERRTARASGCSRAARAGPGAPAGHAPALARTAATADRTRPYRRGGIERRLAIPAPTVRCVAVTA
ESRKPWHTARGRIGTLI

Sequences:

>Translated_97_residues
MLSRPRAAPPRRGVPEERRTARASGCSRAARAGPGAPAGHAPALARTAATADRTRPYRRGGIERRLAIPAPTVRCVAVTA
ESRKPWHTARGRIGTLI
>Mature_97_residues
MLSRPRAAPPRRGVPEERRTARASGCSRAARAGPGAPAGHAPALARTAATADRTRPYRRGGIERRLAIPAPTVRCVAVTA
ESRKPWHTARGRIGTLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10325; Mature: 10325

Theoretical pI: Translated: 12.59; Mature: 12.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRPRAAPPRRGVPEERRTARASGCSRAARAGPGAPAGHAPALARTAATADRTRPYRRG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHC
GIERRLAIPAPTVRCVAVTAESRKPWHTARGRIGTLI
CCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSRPRAAPPRRGVPEERRTARASGCSRAARAGPGAPAGHAPALARTAATADRTRPYRRG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHC
GIERRLAIPAPTVRCVAVTAESRKPWHTARGRIGTLI
CCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA