Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635524

Identifier: 221635524

GI number: 221635524

Start: 114678

End: 115337

Strand: Reverse

Name: 221635524

Synonym: trd_A0118

Alternate gene names: NA

Gene position: 115337-114678 (Counterclockwise)

Preceding gene: 221635526

Following gene: 221635523

Centisome position: 12.57

GC content: 64.24

Gene sequence:

>660_bases
ATGCCGCGCTCCTCGGCCGCGTCAGCCAGCGCGCCAGCCCCCGGCCGGAACCGCACCGTCACGTTGCTCGGTATCCTGAG
TGGTCTCCTCCTGCTCGCCCTGTTGGCCAGCGGGGCGCTCGCTTACGTCGAGCTCGATCGCCGCCAGGCCCGCGAGCGAG
CTCTCGGGGAGCAAATCGCCTCACTCTCCCAGGCGAACCGCGATTTCCAGACACAAGTGCAGTCGCTCACCAGCGAGCGC
GACCGGTTGGCGACCGAGCGCGACCAGCTGATTGGCGAGCGAGATCGCCTCCAGTCTCGCCTGAACGAGCTCATGGCGAC
GAACGCCGAGCAGGAAAAGCGGATTCAGGAACTCACCGGGCAGGTCCAAGAGCAGAGCCGTCAGCTCAGCCAGGTGCGCG
AGGAAGCCACCCGCCAGCAGCAGCGTGCCGAGACAGCTGAAAATATTGGTAGTATTCTCACGCGGGTTGTGCTCCTCGAT
GACCAGATTCACAACGAGTTCGACAACCTCATCGATGCGATGACAGACATGCAGAACGCCTATCGATACGGTGACCGCAT
CGCATTCGCGAACGCCTACGAACGAGGGCTCCAAGCGGCGCGACGCTTGGACCAGTTGTTCGCCCAGCGCGACCAGCTGC
TGGCGCAGCTCGGCTTCTAG

Upstream 100 bases:

>100_bases
AGCCAGCAGCGATGCTTCGCTGCCCGCACCGGACGAGCCGAAGGGGCAGCCAGCGCCTCCCTCGCCGCCAGATCATCCAG
CCGCACCGGGTGAGCCAGCC

Downstream 100 bases:

>100_bases
GAGGCAGGCATGGGGCGAGCCAACTCGCTGCTGCTCGTCGCAGTGTTGTTCGCTGGACTCCTGACGCTGGCGCTGGCTGG
GCTGGCCGTCGCCCGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MPRSSAASASAPAPGRNRTVTLLGILSGLLLLALLASGALAYVELDRRQARERALGEQIASLSQANRDFQTQVQSLTSER
DRLATERDQLIGERDRLQSRLNELMATNAEQEKRIQELTGQVQEQSRQLSQVREEATRQQQRAETAENIGSILTRVVLLD
DQIHNEFDNLIDAMTDMQNAYRYGDRIAFANAYERGLQAARRLDQLFAQRDQLLAQLGF

Sequences:

>Translated_219_residues
MPRSSAASASAPAPGRNRTVTLLGILSGLLLLALLASGALAYVELDRRQARERALGEQIASLSQANRDFQTQVQSLTSER
DRLATERDQLIGERDRLQSRLNELMATNAEQEKRIQELTGQVQEQSRQLSQVREEATRQQQRAETAENIGSILTRVVLLD
DQIHNEFDNLIDAMTDMQNAYRYGDRIAFANAYERGLQAARRLDQLFAQRDQLLAQLGF
>Mature_218_residues
PRSSAASASAPAPGRNRTVTLLGILSGLLLLALLASGALAYVELDRRQARERALGEQIASLSQANRDFQTQVQSLTSERD
RLATERDQLIGERDRLQSRLNELMATNAEQEKRIQELTGQVQEQSRQLSQVREEATRQQQRAETAENIGSILTRVVLLDD
QIHNEFDNLIDAMTDMQNAYRYGDRIAFANAYERGLQAARRLDQLFAQRDQLLAQLGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24640; Mature: 24509

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSSAASASAPAPGRNRTVTLLGILSGLLLLALLASGALAYVELDRRQARERALGEQIA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
SLSQANRDFQTQVQSLTSERDRLATERDQLIGERDRLQSRLNELMATNAEQEKRIQELTG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QVQEQSRQLSQVREEATRQQQRAETAENIGSILTRVVLLDDQIHNEFDNLIDAMTDMQNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRYGDRIAFANAYERGLQAARRLDQLFAQRDQLLAQLGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRSSAASASAPAPGRNRTVTLLGILSGLLLLALLASGALAYVELDRRQARERALGEQIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
SLSQANRDFQTQVQSLTSERDRLATERDQLIGERDRLQSRLNELMATNAEQEKRIQELTG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QVQEQSRQLSQVREEATRQQQRAETAENIGSILTRVVLLDDQIHNEFDNLIDAMTDMQNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRYGDRIAFANAYERGLQAARRLDQLFAQRDQLLAQLGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA