Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635526

Identifier: 221635526

GI number: 221635526

Start: 115580

End: 116920

Strand: Reverse

Name: 221635526

Synonym: trd_A0120

Alternate gene names: NA

Gene position: 116920-115580 (Counterclockwise)

Preceding gene: 221635530

Following gene: 221635524

Centisome position: 12.74

GC content: 66.59

Gene sequence:

>1341_bases
ATGCGTTCACGATGGTTCGTCACAGCCCTGCTGCTCGCGACGCTGCTCGCTCCCGCGCTCCCTGTGAGCGCCCAGCAACC
CGGCCTCAGCGTCGCGTTCTGGCGTACCTGGGCGCGGGCTGATCGCCCGGTCGCCGAAGGACGTGCTGCCCGCACCTGGA
TGTGGGGCCCAGCTCCCATCACCCACGTACTGGTCGAGGAGTACGACGAAGCGACCGACTTCGACGGGGACGTCCTCGGG
TTCCGCATGGTCCAGTACTTCGACAAAACGCGCATGGAGATCACCGATATCGGTGCCGACCCCGTCAATCCCTGGTACGT
GACCAACGGGCTTCTGGCCAAGGAGCTCATCACCGGTCAGGTCCAACTCGGTCACAACCGGTTCGCCCAAGCCCCCGCTG
CCCGCGTCCCGGTCGCTGGTGATCTCGACGATCCGAACGCCCCGACCTATGCCAGCTTCCAGCCGCTCATGGGGTACCAA
CCCTTGCCGGTCGGTATGACCATCATCCAGACCGTCGACCGGAACGGCACCGTCGGGGCCGACCAAACGGTCGCCCGCTA
CGGGGTGACTGCTGCTGCCCTGGTGCGCGAGACGAATCACACGGTGGCCAGCGTCTTCTGGGACTTCATGAACGCCCGCG
GCACGGTGTACAGCGATGGGGCCTTCCGGGAGGACCGCCTCTTCGAGAATCCCTTCTACGCCACTGGCTTCCCGCTCACC
GAGGCCTACTGGACGACCGTCCGCGTCGGCGGTGTCCCCAAGCGCGTCCTCGTCCAGGTCTTCGAGCGTCGCGTGCTCAC
CTACACGCCGGATAACCCACCCGGCTGGCGCGTCGAGGCTGGGAACGTGGGACTCCATTACTACCAGTGGCGCTACGGCC
AGCTCGGCGAGCAACCGGTCACCTGGGATACGGCCCGGCCGGAGGAACTCCCGTACTACGACGCCATCATCCCGACCGTC
TTCCCGCTCGCCGCGGAACTCCAGCCGCTCGCAGCCATGCTCGATAATCCTGCCCTCGATGCTCCTGGTTGGCGCGCTGA
CATCGAGCGCCGCCTGATCTTCCTCCAGGACTGCGCCCGAGCCATGCGCGAAGCGACGCCACCACCGACGCTCTCGGCGT
TCCATTCCGAGCTGATGGTCGGACTCGAACTGGTGGAGCGCGGTGCGGTCCGTATCCGTCGCGCGCTCGATACCCGCGAT
CCGGTGCTCCTCTGGCAAGGCCGCGACGATATCGCAGCAGGCCTGCGAGCCTTCGCCAACGCATTCGAGCGCTACAGGAA
CCAGCTGCGAGCAGTGCCTGGGTCCGAGCCGGTCGTCTTCCTCGCGGAGGGAGTGCACTGA

Upstream 100 bases:

>100_bases
TCGCACTCCGCGCTCGTTCCTGCAGCATGGGAACCCCTGTGTTCCCGTCGCTCGACGATCCTGGTCACGAGTGGTCGAGT
GGTCCGAGAGGTGGAGAACG

Downstream 100 bases:

>100_bases
TGCGATGCACCGCTTGCCAGGCTGCTTTACCGGCTGAGGCACGCTTCTGCCCTGCTTGTGGTCAACCCGTGCCTGATCCT
GTGCCTACGCCGGACACCGC

Product: peptidase domain protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MRSRWFVTALLLATLLAPALPVSAQQPGLSVAFWRTWARADRPVAEGRAARTWMWGPAPITHVLVEEYDEATDFDGDVLG
FRMVQYFDKTRMEITDIGADPVNPWYVTNGLLAKELITGQVQLGHNRFAQAPAARVPVAGDLDDPNAPTYASFQPLMGYQ
PLPVGMTIIQTVDRNGTVGADQTVARYGVTAAALVRETNHTVASVFWDFMNARGTVYSDGAFREDRLFENPFYATGFPLT
EAYWTTVRVGGVPKRVLVQVFERRVLTYTPDNPPGWRVEAGNVGLHYYQWRYGQLGEQPVTWDTARPEELPYYDAIIPTV
FPLAAELQPLAAMLDNPALDAPGWRADIERRLIFLQDCARAMREATPPPTLSAFHSELMVGLELVERGAVRIRRALDTRD
PVLLWQGRDDIAAGLRAFANAFERYRNQLRAVPGSEPVVFLAEGVH

Sequences:

>Translated_446_residues
MRSRWFVTALLLATLLAPALPVSAQQPGLSVAFWRTWARADRPVAEGRAARTWMWGPAPITHVLVEEYDEATDFDGDVLG
FRMVQYFDKTRMEITDIGADPVNPWYVTNGLLAKELITGQVQLGHNRFAQAPAARVPVAGDLDDPNAPTYASFQPLMGYQ
PLPVGMTIIQTVDRNGTVGADQTVARYGVTAAALVRETNHTVASVFWDFMNARGTVYSDGAFREDRLFENPFYATGFPLT
EAYWTTVRVGGVPKRVLVQVFERRVLTYTPDNPPGWRVEAGNVGLHYYQWRYGQLGEQPVTWDTARPEELPYYDAIIPTV
FPLAAELQPLAAMLDNPALDAPGWRADIERRLIFLQDCARAMREATPPPTLSAFHSELMVGLELVERGAVRIRRALDTRD
PVLLWQGRDDIAAGLRAFANAFERYRNQLRAVPGSEPVVFLAEGVH
>Mature_446_residues
MRSRWFVTALLLATLLAPALPVSAQQPGLSVAFWRTWARADRPVAEGRAARTWMWGPAPITHVLVEEYDEATDFDGDVLG
FRMVQYFDKTRMEITDIGADPVNPWYVTNGLLAKELITGQVQLGHNRFAQAPAARVPVAGDLDDPNAPTYASFQPLMGYQ
PLPVGMTIIQTVDRNGTVGADQTVARYGVTAAALVRETNHTVASVFWDFMNARGTVYSDGAFREDRLFENPFYATGFPLT
EAYWTTVRVGGVPKRVLVQVFERRVLTYTPDNPPGWRVEAGNVGLHYYQWRYGQLGEQPVTWDTARPEELPYYDAIIPTV
FPLAAELQPLAAMLDNPALDAPGWRADIERRLIFLQDCARAMREATPPPTLSAFHSELMVGLELVERGAVRIRRALDTRD
PVLLWQGRDDIAAGLRAFANAFERYRNQLRAVPGSEPVVFLAEGVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49817; Mature: 49817

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRWFVTALLLATLLAPALPVSAQQPGLSVAFWRTWARADRPVAEGRAARTWMWGPAPI
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHCCCCHHCCCCCCEEECCCCHH
THVLVEEYDEATDFDGDVLGFRMVQYFDKTRMEITDIGADPVNPWYVTNGLLAKELITGQ
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCHHHHHHHHCC
VQLGHNRFAQAPAARVPVAGDLDDPNAPTYASFQPLMGYQPLPVGMTIIQTVDRNGTVGA
CEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHECCCCCCCCC
DQTVARYGVTAAALVRETNHTVASVFWDFMNARGTVYSDGAFREDRLFENPFYATGFPLT
CHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCH
EAYWTTVRVGGVPKRVLVQVFERRVLTYTPDNPPGWRVEAGNVGLHYYQWRYGQLGEQPV
HHHEEEEEECCCCHHHHHHHHHCCEEEECCCCCCCCEEECCCCCEEEEEEECCCCCCCCC
TWDTARPEELPYYDAIIPTVFPLAAELQPLAAMLDNPALDAPGWRADIERRLIFLQDCAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
AMREATPPPTLSAFHSELMVGLELVERGAVRIRRALDTRDPVLLWQGRDDIAAGLRAFAN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
AFERYRNQLRAVPGSEPVVFLAEGVH
HHHHHHHHHHCCCCCCCEEEEECCCC
>Mature Secondary Structure
MRSRWFVTALLLATLLAPALPVSAQQPGLSVAFWRTWARADRPVAEGRAARTWMWGPAPI
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHCCCCHHCCCCCCEEECCCCHH
THVLVEEYDEATDFDGDVLGFRMVQYFDKTRMEITDIGADPVNPWYVTNGLLAKELITGQ
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCHHHHHHHHCC
VQLGHNRFAQAPAARVPVAGDLDDPNAPTYASFQPLMGYQPLPVGMTIIQTVDRNGTVGA
CEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHECCCCCCCCC
DQTVARYGVTAAALVRETNHTVASVFWDFMNARGTVYSDGAFREDRLFENPFYATGFPLT
CHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCH
EAYWTTVRVGGVPKRVLVQVFERRVLTYTPDNPPGWRVEAGNVGLHYYQWRYGQLGEQPV
HHHEEEEEECCCCHHHHHHHHHCCEEEECCCCCCCCEEECCCCCEEEEEEECCCCCCCCC
TWDTARPEELPYYDAIIPTVFPLAAELQPLAAMLDNPALDAPGWRADIERRLIFLQDCAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
AMREATPPPTLSAFHSELMVGLELVERGAVRIRRALDTRDPVLLWQGRDDIAAGLRAFAN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
AFERYRNQLRAVPGSEPVVFLAEGVH
HHHHHHHHHHCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA