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The map label for this gene is ytxE [H]

Identifier: 221635437

GI number: 221635437

Start: 27223

End: 27936

Strand: Reverse

Name: ytxE [H]

Synonym: trd_A0031

Alternate gene names: 221635437

Gene position: 27936-27223 (Counterclockwise)

Preceding gene: 221635438

Following gene: 221635436

Centisome position: 3.04

GC content: 62.89

Gene sequence:

>714_bases
ATGGCTCGACGCCAGCGGCATCATGAAGGCGAGCACGAGAACCTGGAGCGCTGGCTCATCACCTATGCCGATCTCATCAC
GCTGTTGCTCATCTTCTTCGTCGTCATGTACTCGATCTCGCAGGCCGACCTGGCCAAGTTCCGTCAGGTGGCTAGTTCGT
TACGGGCTGCCTTCAATCTAGATGTGCTCACTGCTCCACCACCTGGCCAGTCGATGGTCACGCCTCTCGAGCAGGATCCC
CGCTTCAATGCGTACCTGAGTGTCCGCGCGCAAGTGGCTTCCCTCTTCACTCGGCTCGGCCTCGACCGGCAGGGTGCGGA
GGTCGAGCTGACGAGCGAAGGGATCGTCATCCATCTCTCCGATGCGATCCTCTTTCCACCCGGACAGGCCGAGCTCCGTC
CCGAGGCCCAGCGCGTGTTGGACGGGATCGCGGCCATCATCGAGCCTTTGCCGAACCCGATCCGCGTCGAGGGGCATACT
GACAGTACTCCGCCTCCGCCCGGCTCGTACCCGGACAATTGGGAGCTTTCGGCTATGCGTGCCGTCAACACGGTGCGGTA
TCTCACCGATGTGGCTGGCTTGCCGCCCCAACGCCTCAGTGCCGCTGGCTATGGCGAGTTTCGGCCTCGGGCCTCCAACG
AAACGGTGGAAGGACGACGCAAGAACCGGCGAGTCGATATCGTGATCGTCCAGCCGACACTCGGCGGCCCGTGA

Upstream 100 bases:

>100_bases
AAAGCTCCTCGTGCACCTTCCGCCGCAAGCGCGCGCGACCGAGCCGAAGGCCGCTCCCGCCGGTGCTCGGGCGATGGCGC
CGGGTGGGGAGTGATCGGCC

Downstream 100 bases:

>100_bases
TCGAGGGAGACGGGGATGATCAAGCGGTTACTCTCAAAACGACTTCTGCTGCTCGTGATTCCGCTCGTTCTGGTGGTCGC
TGGTGCCGGTTTCTTTCTCC

Product: chemotaxis protein MotB (Motility protein B)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MARRQRHHEGEHENLERWLITYADLITLLLIFFVVMYSISQADLAKFRQVASSLRAAFNLDVLTAPPPGQSMVTPLEQDP
RFNAYLSVRAQVASLFTRLGLDRQGAEVELTSEGIVIHLSDAILFPPGQAELRPEAQRVLDGIAAIIEPLPNPIRVEGHT
DSTPPPPGSYPDNWELSAMRAVNTVRYLTDVAGLPPQRLSAAGYGEFRPRASNETVEGRRKNRRVDIVIVQPTLGGP

Sequences:

>Translated_237_residues
MARRQRHHEGEHENLERWLITYADLITLLLIFFVVMYSISQADLAKFRQVASSLRAAFNLDVLTAPPPGQSMVTPLEQDP
RFNAYLSVRAQVASLFTRLGLDRQGAEVELTSEGIVIHLSDAILFPPGQAELRPEAQRVLDGIAAIIEPLPNPIRVEGHT
DSTPPPPGSYPDNWELSAMRAVNTVRYLTDVAGLPPQRLSAAGYGEFRPRASNETVEGRRKNRRVDIVIVQPTLGGP
>Mature_236_residues
ARRQRHHEGEHENLERWLITYADLITLLLIFFVVMYSISQADLAKFRQVASSLRAAFNLDVLTAPPPGQSMVTPLEQDPR
FNAYLSVRAQVASLFTRLGLDRQGAEVELTSEGIVIHLSDAILFPPGQAELRPEAQRVLDGIAAIIEPLPNPIRVEGHTD
STPPPPGSYPDNWELSAMRAVNTVRYLTDVAGLPPQRLSAAGYGEFRPRASNETVEGRRKNRRVDIVIVQPTLGGP

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=262, Percent_Identity=25.9541984732824, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI48994946, Length=126, Percent_Identity=31.7460317460317, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 26264; Mature: 26133

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRQRHHEGEHENLERWLITYADLITLLLIFFVVMYSISQADLAKFRQVASSLRAAFNL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
DVLTAPPPGQSMVTPLEQDPRFNAYLSVRAQVASLFTRLGLDRQGAEVELTSEGIVIHLS
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEC
DAILFPPGQAELRPEAQRVLDGIAAIIEPLPNPIRVEGHTDSTPPPPGSYPDNWELSAMR
CEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHH
AVNTVRYLTDVAGLPPQRLSAAGYGEFRPRASNETVEGRRKNRRVDIVIVQPTLGGP
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCC
>Mature Secondary Structure 
ARRQRHHEGEHENLERWLITYADLITLLLIFFVVMYSISQADLAKFRQVASSLRAAFNL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
DVLTAPPPGQSMVTPLEQDPRFNAYLSVRAQVASLFTRLGLDRQGAEVELTSEGIVIHLS
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEC
DAILFPPGQAELRPEAQRVLDGIAAIIEPLPNPIRVEGHTDSTPPPPGSYPDNWELSAMR
CEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHH
AVNTVRYLTDVAGLPPQRLSAAGYGEFRPRASNETVEGRRKNRRVDIVIVQPTLGGP
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]