| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is fliL
Identifier: 221635436
GI number: 221635436
Start: 26662
End: 27207
Strand: Reverse
Name: fliL
Synonym: trd_A0030
Alternate gene names: NA
Gene position: 27207-26662 (Counterclockwise)
Preceding gene: 221635437
Following gene: 221635435
Centisome position: 2.96
GC content: 60.44
Gene sequence:
>546_bases ATGATCAAGCGGTTACTCTCAAAACGACTTCTGCTGCTCGTGATTCCGCTCGTTCTGGTGGTCGCTGGTGCCGGTTTCTT TCTCCTCGGTGGCGCCGGTGCAGCGCCCTTCGTCCTCAACATCACGATCAACCAGTCCGGGGACGGGGGGAAGTCGGCAG CACCGGCCGAGCAGCATCTCACCGTCTCGCTCGGCGAGCGGATCGTCAACCTGGCTGACCCCGGTGGCTATCGCTATCTC AAGACGGAGATCGTCGTGGAAGTCGCCGTCGACCAGAAAACCTACGAGCGTCTCACCGCCGCAGGCGGAGGCGGCGGTCA TGGTGGTGGCGGTGGCAGCACCGATCCGCTGCGCGCTGAGCTGGAGCACTCCTGGCCCAAAATCCAGGACACCTTGACGA TGGTGCTTACGTCCAAGACCGTCGACGAACTCGCGACACTCGAAGGGAAAGAACACCTCAAGGACGAACTCCGCGAGAAG CTCCAGCCAGCTTTCGGTGACTACAAAATTACCGAGGTTTATCTCACGCAGTTCGTGATCCAGTGA
Upstream 100 bases:
>100_bases GGCCTCCAACGAAACGGTGGAAGGACGACGCAAGAACCGGCGAGTCGATATCGTGATCGTCCAGCCGACACTCGGCGGCC CGTGATCGAGGGAGACGGGG
Downstream 100 bases:
>100_bases GGAGGCTCGCATGTCGCTCAGTCGTACCCGACCGACGACACGAGCCGCTCGCCGCGAACGCGGCAAGCCGATTCCCTACG ATTTCCGTCGTCCGGATAAG
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MIKRLLSKRLLLLVIPLVLVVAGAGFFLLGGAGAAPFVLNITINQSGDGGKSAAPAEQHLTVSLGERIVNLADPGGYRYL KTEIVVEVAVDQKTYERLTAAGGGGGHGGGGGSTDPLRAELEHSWPKIQDTLTMVLTSKTVDELATLEGKEHLKDELREK LQPAFGDYKITEVYLTQFVIQ
Sequences:
>Translated_181_residues MIKRLLSKRLLLLVIPLVLVVAGAGFFLLGGAGAAPFVLNITINQSGDGGKSAAPAEQHLTVSLGERIVNLADPGGYRYL KTEIVVEVAVDQKTYERLTAAGGGGGHGGGGGSTDPLRAELEHSWPKIQDTLTMVLTSKTVDELATLEGKEHLKDELREK LQPAFGDYKITEVYLTQFVIQ >Mature_181_residues MIKRLLSKRLLLLVIPLVLVVAGAGFFLLGGAGAAPFVLNITINQSGDGGKSAAPAEQHLTVSLGERIVNLADPGGYRYL KTEIVVEVAVDQKTYERLTAAGGGGGHGGGGGSTDPLRAELEHSWPKIQDTLTMVLTSKTVDELATLEGKEHLKDELREK LQPAFGDYKITEVYLTQFVIQ
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19339; Mature: 19339
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRLLSKRLLLLVIPLVLVVAGAGFFLLGGAGAAPFVLNITINQSGDGGKSAAPAEQHL CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHHHE TVSLGERIVNLADPGGYRYLKTEIVVEVAVDQKTYERLTAAGGGGGHGGGGGSTDPLRAE EHHHHHHHHHCCCCCCCEEEEHEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCHHHH LEHSWPKIQDTLTMVLTSKTVDELATLEGKEHLKDELREKLQPAFGDYKITEVYLTQFVI HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHC Q C >Mature Secondary Structure MIKRLLSKRLLLLVIPLVLVVAGAGFFLLGGAGAAPFVLNITINQSGDGGKSAAPAEQHL CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHHHE TVSLGERIVNLADPGGYRYLKTEIVVEVAVDQKTYERLTAAGGGGGHGGGGGSTDPLRAE EHHHHHHHHHCCCCCCCEEEEHEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCHHHH LEHSWPKIQDTLTMVLTSKTVDELATLEGKEHLKDELREKLQPAFGDYKITEVYLTQFVI HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA