Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is pgsA

Identifier: 221633936

GI number: 221633936

Start: 1982741

End: 1983322

Strand: Reverse

Name: pgsA

Synonym: trd_1964

Alternate gene names: NA

Gene position: 1983322-1982741 (Counterclockwise)

Preceding gene: 221633937

Following gene: 221633935

Centisome position: 99.02

GC content: 65.98

Gene sequence:

>582_bases
GTGCTCAGTTCACTGGTAGCCGACCGGGTCCGTCTCCGCTTGCAGCGAGTCGGCGAACTCGTCGGGCGAACTGGCCTCAC
ACCCAACCAGTTGACGATGATCGGATTGTTCCTCAACGGGCTCGTCGGATGGGTCGCCGCGGAGGGAGCTTTTCGCTGGG
CCGGTGGGCTCCTACTCCTCGCCGGGATCTTCGACATGCTGGATGGGGCAGTCGCCCGTGCCACCGGGCGCGTCACGCGC
TTCGGCGGCATCCTCGATTCGGTTCTGGACCGCTACGCCGAGGCACTGGTCATCGGCGGACTCCTCGTCTGGTTCACCCG
TTCCTCGGCGGGAACGGTGCCGGTTCTCCTCTGCTACGCCGTCATCGTCGGCTCCATTCTCGTGAGCTATGTCCGCGCGC
GTGCTGAAGGTGCTGGTCTCCAGTTGACGCAGGGCTTTTTCGCCCGACCGGAACGCATCATCGTGCTGGCGCTCGGACTC
TTAGCCGAGCGACCGATCTGGGCGCTCTGGCTCCTGGCCGTGGCGACCAACCTGACGGTGCTCCAGCGGCTCTGGCTGGT
CCGACGCGCCTCTGGAGCATGA

Upstream 100 bases:

>100_bases
ACTCTTGCGCGGTGTTCGCGAGACGACAACCGAACCACCGATCGATTGGTGGACCTCGCTCCGTCTCGCCTTGAAGGCAT
GGTCAGGGAGGTAAGCTGCA

Downstream 100 bases:

>100_bases
GTCTCATGCGCCGGATCATGCTGCTCCTTCTGCTTCTTGGGATCCTGACCGGCTGCCTGCCAGTCGGTCGTTCCCCTGCT
GGCCCGACCAGCGAGATGAC

Product: CDP-diacylglycerol--glycerol-3-phosphate 3 -phosphatidyltransferase PgsA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLSSLVADRVRLRLQRVGELVGRTGLTPNQLTMIGLFLNGLVGWVAAEGAFRWAGGLLLLAGIFDMLDGAVARATGRVTR
FGGILDSVLDRYAEALVIGGLLVWFTRSSAGTVPVLLCYAVIVGSILVSYVRARAEGAGLQLTQGFFARPERIIVLALGL
LAERPIWALWLLAVATNLTVLQRLWLVRRASGA

Sequences:

>Translated_193_residues
MLSSLVADRVRLRLQRVGELVGRTGLTPNQLTMIGLFLNGLVGWVAAEGAFRWAGGLLLLAGIFDMLDGAVARATGRVTR
FGGILDSVLDRYAEALVIGGLLVWFTRSSAGTVPVLLCYAVIVGSILVSYVRARAEGAGLQLTQGFFARPERIIVLALGL
LAERPIWALWLLAVATNLTVLQRLWLVRRASGA
>Mature_193_residues
MLSSLVADRVRLRLQRVGELVGRTGLTPNQLTMIGLFLNGLVGWVAAEGAFRWAGGLLLLAGIFDMLDGAVARATGRVTR
FGGILDSVLDRYAEALVIGGLLVWFTRSSAGTVPVLLCYAVIVGSILVSYVRARAEGAGLQLTQGFFARPERIIVLALGL
LAERPIWALWLLAVATNLTVLQRLWLVRRASGA

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: NA

Molecular weight: Translated: 20741; Mature: 20741

Theoretical pI: Translated: 11.78; Mature: 11.78

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSLVADRVRLRLQRVGELVGRTGLTPNQLTMIGLFLNGLVGWVAAEGAFRWAGGLLLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AGIFDMLDGAVARATGRVTRFGGILDSVLDRYAEALVIGGLLVWFTRSSAGTVPVLLCYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VIVGSILVSYVRARAEGAGLQLTQGFFARPERIIVLALGLLAERPIWALWLLAVATNLTV
HHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LQRLWLVRRASGA
HHHHHHHHHCCCC
>Mature Secondary Structure
MLSSLVADRVRLRLQRVGELVGRTGLTPNQLTMIGLFLNGLVGWVAAEGAFRWAGGLLLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AGIFDMLDGAVARATGRVTRFGGILDSVLDRYAEALVIGGLLVWFTRSSAGTVPVLLCYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VIVGSILVSYVRARAEGAGLQLTQGFFARPERIIVLALGLLAERPIWALWLLAVATNLTV
HHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LQRLWLVRRASGA
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]