Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633889

Identifier: 221633889

GI number: 221633889

Start: 1925235

End: 1927016

Strand: Reverse

Name: 221633889

Synonym: trd_1916

Alternate gene names: NA

Gene position: 1927016-1925235 (Counterclockwise)

Preceding gene: 221633890

Following gene: 221633888

Centisome position: 96.21

GC content: 68.52

Gene sequence:

>1782_bases
GTGCTCGCAACTCGCTGGTTGCGGCTTCTCCTGGTGTCCACGACACTGCTCTCCGGCCTCGCGCTGCCGGTCCAGCCAGC
AGCAGCCGCGCGCGATCCCGCCAGCTGGCCGGAGTTCTTCGGGATCGTCGGGCGCGACCCCTGGTACGAGTTCAACACCG
ATCCGGAGCGGTATCCAGTCGAACTGAACCGCGCCTTCCTCGAGTCGATGATGGCCGAGATGGCAGCGCTCGGCGCACGC
TGGGTGCGGATCGAGTTCCACGCCGAGTACGACCGCGCACCGGGTCCCGGCTGGATCGATTGGGACAAGCACGATTGGTA
TCTTTGGGACCTCGCGCCCCGCTACGGGATGAAGGTGTTGACGGTCCTCGGTTCGGGGATCCTGGCCGACGTCGACCCCA
CCTACGCCTTCTCGCGCATCGACGAGCCACCCGACCGCGAAGGGCGCAACCACTATACCCGGGCCTTCGTCGAGCGCACG
GCCGAGATCGTTGGGCGCTACGGCGCGGCGCTTGCCGCGGTCGAGCTTTTGAACGAGCCCAATGCCAATGAGCTCTTGTG
GGAGGAGACCGGCGGGCGCGTGCACGCGGTCCGCCCCGAGATCTACGGGCGCCTCGCGGTCGACGTCTACGAGACGGTGA
AACAGCGGAGCCCGTCGACGCGCGTCATCGCTGGGAGCCTGCTCTTCGACCGGCATGCCGACGGTGACCGGCACCTGGCG
TGGCTGGAGGCCGTTTACCAGAGTCCGGCGGTGCAGGACTATCGCAACCGCACCGGTCGCTATCCCTGGGACGCGCTCTC
CCTCCATCCCTACTTCCTGCCAGATGCTGGAAGCGTGCTGGCGGTCGTGCGGGAGCTGCGCGCGCTCCAGCTCGCCTACG
GCGATACGACCCCCATCTGGCTGACCGAGGTGGGACTGCCGGCCGATCCCCCGGCCTGGTCACCGGCCGGCGTCCTGCAG
CCGACAGCGAGCGAACTCGCGCAGGCCGCGTTCCTGCGCCAGGTCTACACGCTCATCTGGGAGCAAGCACCCGAGGTCGA
GCGAGTCTTCTGGTTCAAGTTCGAGGATTTCGGCACCAGCCACGGCTATGCCAGCTGGGGGCTGGTTCGCCTGCTCGATT
CGGGCATGGTCTATGGCCGCGAGGCCATCCCCTGGCCGCGCAAGCCGGCATTTCTGGTCTACCAGCAGCTGGCCCGTCCC
GAAGCGGTGCCGACCAGCCGCGTCCCTCGCCCGGACGACCCGGCAGTGCGCTACTTCCCGCAGACGGGGCACACGCTGCG
CGGCCCCTTCCGGCGCTACTGGGAGCAGAATGGTGGGCTGGCCGCCTTCGGCTACCCGCTCACCGAGCCGTTCTGGAGCG
GCGGGCGGCTAGTCCAGTTCTTCGAGCGGGCCCGCTTCGAGTACTGGCCGGAGTACCGCGGCACCCCGAGCGAGGTGCAA
CTCGCCCACCTCGGCCGGTGGGCGCTCGGCGACCGGTCTTTCGCACCGGAACCACCACCGGAGCGGCTCGGTCCGGACGA
GCGGTACTTCCCGGAGACAGGGTTCGTCGTGCGCGGTGCCTTTCTGCGATACTGGGAGCAGAACGGCGGGCTCGCCCGTT
TCGGGCTGCCGATCAGCCCGGAGTTCCGCGAGGTGAACCCGGCCGACAGGAAGGAATACACCGTGCAGTATTTCGAGCGA
GCGCGCTTCGAGTGGCATCCGGAGGCCAGAGGGACGCTCTACGAGGTGCAACTCGGCCTGCTCGGAACGCAGGCGCTCGC
GACGCTGGGGTGGTACCGCTAG

Upstream 100 bases:

>100_bases
GGCGCTGGAACGGTTCGTGCTCGAGCCGTGGCGGCGAGCCCGCTCCCTCGCCTAGCCAGCGTCGCGGCCGCCTGCCGAAC
GGGAAGGGAAGGGTGCAGCC

Downstream 100 bases:

>100_bases
CTGCTGGGGAGGATCGCCGCATGAGCGAGGCACTGAAACCGGTACACGCGGAACTGGTGCCGGCTCCACCGGGAAGCGGG
CGCTTGCCGTTCGCGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MLATRWLRLLLVSTTLLSGLALPVQPAAAARDPASWPEFFGIVGRDPWYEFNTDPERYPVELNRAFLESMMAEMAALGAR
WVRIEFHAEYDRAPGPGWIDWDKHDWYLWDLAPRYGMKVLTVLGSGILADVDPTYAFSRIDEPPDREGRNHYTRAFVERT
AEIVGRYGAALAAVELLNEPNANELLWEETGGRVHAVRPEIYGRLAVDVYETVKQRSPSTRVIAGSLLFDRHADGDRHLA
WLEAVYQSPAVQDYRNRTGRYPWDALSLHPYFLPDAGSVLAVVRELRALQLAYGDTTPIWLTEVGLPADPPAWSPAGVLQ
PTASELAQAAFLRQVYTLIWEQAPEVERVFWFKFEDFGTSHGYASWGLVRLLDSGMVYGREAIPWPRKPAFLVYQQLARP
EAVPTSRVPRPDDPAVRYFPQTGHTLRGPFRRYWEQNGGLAAFGYPLTEPFWSGGRLVQFFERARFEYWPEYRGTPSEVQ
LAHLGRWALGDRSFAPEPPPERLGPDERYFPETGFVVRGAFLRYWEQNGGLARFGLPISPEFREVNPADRKEYTVQYFER
ARFEWHPEARGTLYEVQLGLLGTQALATLGWYR

Sequences:

>Translated_593_residues
MLATRWLRLLLVSTTLLSGLALPVQPAAAARDPASWPEFFGIVGRDPWYEFNTDPERYPVELNRAFLESMMAEMAALGAR
WVRIEFHAEYDRAPGPGWIDWDKHDWYLWDLAPRYGMKVLTVLGSGILADVDPTYAFSRIDEPPDREGRNHYTRAFVERT
AEIVGRYGAALAAVELLNEPNANELLWEETGGRVHAVRPEIYGRLAVDVYETVKQRSPSTRVIAGSLLFDRHADGDRHLA
WLEAVYQSPAVQDYRNRTGRYPWDALSLHPYFLPDAGSVLAVVRELRALQLAYGDTTPIWLTEVGLPADPPAWSPAGVLQ
PTASELAQAAFLRQVYTLIWEQAPEVERVFWFKFEDFGTSHGYASWGLVRLLDSGMVYGREAIPWPRKPAFLVYQQLARP
EAVPTSRVPRPDDPAVRYFPQTGHTLRGPFRRYWEQNGGLAAFGYPLTEPFWSGGRLVQFFERARFEYWPEYRGTPSEVQ
LAHLGRWALGDRSFAPEPPPERLGPDERYFPETGFVVRGAFLRYWEQNGGLARFGLPISPEFREVNPADRKEYTVQYFER
ARFEWHPEARGTLYEVQLGLLGTQALATLGWYR
>Mature_593_residues
MLATRWLRLLLVSTTLLSGLALPVQPAAAARDPASWPEFFGIVGRDPWYEFNTDPERYPVELNRAFLESMMAEMAALGAR
WVRIEFHAEYDRAPGPGWIDWDKHDWYLWDLAPRYGMKVLTVLGSGILADVDPTYAFSRIDEPPDREGRNHYTRAFVERT
AEIVGRYGAALAAVELLNEPNANELLWEETGGRVHAVRPEIYGRLAVDVYETVKQRSPSTRVIAGSLLFDRHADGDRHLA
WLEAVYQSPAVQDYRNRTGRYPWDALSLHPYFLPDAGSVLAVVRELRALQLAYGDTTPIWLTEVGLPADPPAWSPAGVLQ
PTASELAQAAFLRQVYTLIWEQAPEVERVFWFKFEDFGTSHGYASWGLVRLLDSGMVYGREAIPWPRKPAFLVYQQLARP
EAVPTSRVPRPDDPAVRYFPQTGHTLRGPFRRYWEQNGGLAAFGYPLTEPFWSGGRLVQFFERARFEYWPEYRGTPSEVQ
LAHLGRWALGDRSFAPEPPPERLGPDERYFPETGFVVRGAFLRYWEQNGGLARFGLPISPEFREVNPADRKEYTVQYFER
ARFEWHPEARGTLYEVQLGLLGTQALATLGWYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67830; Mature: 67830

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATRWLRLLLVSTTLLSGLALPVQPAAAARDPASWPEFFGIVGRDPWYEFNTDPERYPV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCH
ELNRAFLESMMAEMAALGARWVRIEFHAEYDRAPGPGWIDWDKHDWYLWDLAPRYGMKVL
HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHH
TVLGSGILADVDPTYAFSRIDEPPDREGRNHYTRAFVERTAEIVGRYGAALAAVELLNEP
HHHCCCCEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NANELLWEETGGRVHAVRPEIYGRLAVDVYETVKQRSPSTRVIAGSLLFDRHADGDRHLA
CCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHEECCCCCCHHHH
WLEAVYQSPAVQDYRNRTGRYPWDALSLHPYFLPDAGSVLAVVRELRALQLAYGDTTPIW
HHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCEE
LTEVGLPADPPAWSPAGVLQPTASELAQAAFLRQVYTLIWEQAPEVERVFWFKFEDFGTS
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
HGYASWGLVRLLDSGMVYGREAIPWPRKPAFLVYQQLARPEAVPTSRVPRPDDPAVRYFP
CCCHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEC
QTGHTLRGPFRRYWEQNGGLAAFGYPLTEPFWSGGRLVQFFERARFEYWPEYRGTPSEVQ
CCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
LAHLGRWALGDRSFAPEPPPERLGPDERYFPETGFVVRGAFLRYWEQNGGLARFGLPISP
HHHCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
EFREVNPADRKEYTVQYFERARFEWHPEARGTLYEVQLGLLGTQALATLGWYR
CCCCCCCCCHHHHHHHHHHHCCCEECCCCCCEEEEEEEHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLATRWLRLLLVSTTLLSGLALPVQPAAAARDPASWPEFFGIVGRDPWYEFNTDPERYPV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCH
ELNRAFLESMMAEMAALGARWVRIEFHAEYDRAPGPGWIDWDKHDWYLWDLAPRYGMKVL
HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHH
TVLGSGILADVDPTYAFSRIDEPPDREGRNHYTRAFVERTAEIVGRYGAALAAVELLNEP
HHHCCCCEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NANELLWEETGGRVHAVRPEIYGRLAVDVYETVKQRSPSTRVIAGSLLFDRHADGDRHLA
CCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHEECCCCCCHHHH
WLEAVYQSPAVQDYRNRTGRYPWDALSLHPYFLPDAGSVLAVVRELRALQLAYGDTTPIW
HHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCEE
LTEVGLPADPPAWSPAGVLQPTASELAQAAFLRQVYTLIWEQAPEVERVFWFKFEDFGTS
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
HGYASWGLVRLLDSGMVYGREAIPWPRKPAFLVYQQLARPEAVPTSRVPRPDDPAVRYFP
CCCHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEC
QTGHTLRGPFRRYWEQNGGLAAFGYPLTEPFWSGGRLVQFFERARFEYWPEYRGTPSEVQ
CCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
LAHLGRWALGDRSFAPEPPPERLGPDERYFPETGFVVRGAFLRYWEQNGGLARFGLPISP
HHHCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
EFREVNPADRKEYTVQYFERARFEWHPEARGTLYEVQLGLLGTQALATLGWYR
CCCCCCCCCHHHHHHHHHHHCCCEECCCCCCEEEEEEEHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA