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The map label for this gene is yidA [H]

Identifier: 221633890

GI number: 221633890

Start: 1927062

End: 1927961

Strand: Reverse

Name: yidA [H]

Synonym: trd_1917

Alternate gene names: 221633890

Gene position: 1927961-1927062 (Counterclockwise)

Preceding gene: 221633893

Following gene: 221633889

Centisome position: 96.25

GC content: 72.22

Gene sequence:

>900_bases
ATGGAGCGGCACGAACCGCCACTTTCCACCCAGCGCCTTTTCCGCATGGTCGTCCTCGACATCGACGGTACGTTGCTCGA
CCCGAGCGATGTCGTGCGACCGGTCGTGCGGGCAGCCATCGCGGAGTGTCGTCAGCTCGGCGTTCCGGTCGCGCTGGCGA
CCGGTCGGAGGCTGTGCGCGACCCGTCCGGTACTGGCCGAACTCGGTCTGCCGCTCCCGCTCGTCCTGGTGAACGGCGCG
CTGGTCTGGGACGCCGAGCGCGAGGAAGCGCTGGCCGAGCGACCGCTCGCTCGGCAGGCACTGGCTCGCGCGCTGGCCGA
GGCCGAGCGCGAGGGGCTGGGGGCGCTCGCCCTCCGCGGGCTGGCCAGTGGGGAGCGGCTCGTCCTGGTCACCGACCCGC
TGCCGGCACTCCCCGAGTTCGAGCGAGAGCTGTTGCCGCGCACCGGTGAACTCGACCGGTTGCCCGCCGCGGCCGTTGTG
GACCTGCCCGATGTTCTCACCATCGACCTTTTCGGTCCGGAGCGCGCCCTGCGGCGCGCCACGGCCCGCCTGGCCCGCGC
CGGTCTTCCCGTCTATCACCATGGCCCGTTCGAGTTGATCCCTGCCTTGCCACGCTGGGTGGCCAACGTGCACGCACCGG
GCGTGAGCAAGGCGAGCGGTGTGGAGATCCTGGCTCGTCGGTTCGGTCTCACGCTCGAGGACGTCCTCGCCGTGGGGGAC
GGCGAGAACGACCTCCCCCTCCTGCGCCGCGCTGGCCTGGGCGTGGCGATGGGGAACGCGCCGGACTACGTGCGGGCTCA
GGCCGATGCCGTCGTGCGGGGGCATGACGAGGACGGAGTCGCCGAGGCGCTGGAACGGTTCGTGCTCGAGCCGTGGCGGC
GAGCCCGCTCCCTCGCCTAG

Upstream 100 bases:

>100_bases
CATCGTCGCACGGACAGTAGAACGCCGCATCAGGAATCCGCAACGACCGCTGACAGATCCTGTGGTATACCGGGATCGGT
GAGGAAGCTGAGGAGTCGGG

Downstream 100 bases:

>100_bases
CCAGCGTCGCGGCCGCCTGCCGAACGGGAAGGGAAGGGTGCAGCCGTGCTCGCAACTCGCTGGTTGCGGCTTCTCCTGGT
GTCCACGACACTGCTCTCCG

Product: putative haloacid dehalogenase-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MERHEPPLSTQRLFRMVVLDIDGTLLDPSDVVRPVVRAAIAECRQLGVPVALATGRRLCATRPVLAELGLPLPLVLVNGA
LVWDAEREEALAERPLARQALARALAEAEREGLGALALRGLASGERLVLVTDPLPALPEFERELLPRTGELDRLPAAAVV
DLPDVLTIDLFGPERALRRATARLARAGLPVYHHGPFELIPALPRWVANVHAPGVSKASGVEILARRFGLTLEDVLAVGD
GENDLPLLRRAGLGVAMGNAPDYVRAQADAVVRGHDEDGVAEALERFVLEPWRRARSLA

Sequences:

>Translated_299_residues
MERHEPPLSTQRLFRMVVLDIDGTLLDPSDVVRPVVRAAIAECRQLGVPVALATGRRLCATRPVLAELGLPLPLVLVNGA
LVWDAEREEALAERPLARQALARALAEAEREGLGALALRGLASGERLVLVTDPLPALPEFERELLPRTGELDRLPAAAVV
DLPDVLTIDLFGPERALRRATARLARAGLPVYHHGPFELIPALPRWVANVHAPGVSKASGVEILARRFGLTLEDVLAVGD
GENDLPLLRRAGLGVAMGNAPDYVRAQADAVVRGHDEDGVAEALERFVLEPWRRARSLA
>Mature_299_residues
MERHEPPLSTQRLFRMVVLDIDGTLLDPSDVVRPVVRAAIAECRQLGVPVALATGRRLCATRPVLAELGLPLPLVLVNGA
LVWDAEREEALAERPLARQALARALAEAEREGLGALALRGLASGERLVLVTDPLPALPEFERELLPRTGELDRLPAAAVV
DLPDVLTIDLFGPERALRRATARLARAGLPVYHHGPFELIPALPRWVANVHAPGVSKASGVEILARRFGLTLEDVLAVGD
GENDLPLLRRAGLGVAMGNAPDYVRAQADAVVRGHDEDGVAEALERFVLEPWRRARSLA

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=291, Percent_Identity=30.5841924398625, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 32292; Mature: 32292

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERHEPPLSTQRLFRMVVLDIDGTLLDPSDVVRPVVRAAIAECRQLGVPVALATGRRLCA
CCCCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHH
TRPVLAELGLPLPLVLVNGALVWDAEREEALAERPLARQALARALAEAEREGLGALALRG
CCHHHHHCCCCHHHHHHCCEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHH
LASGERLVLVTDPLPALPEFERELLPRTGELDRLPAAAVVDLPDVLTIDLFGPERALRRA
CCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEECCHHHHHHHH
TARLARAGLPVYHHGPFELIPALPRWVANVHAPGVSKASGVEILARRFGLTLEDVLAVGD
HHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCC
GENDLPLLRRAGLGVAMGNAPDYVRAQADAVVRGHDEDGVAEALERFVLEPWRRARSLA
CCCCCHHHHHCCCCEEECCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERHEPPLSTQRLFRMVVLDIDGTLLDPSDVVRPVVRAAIAECRQLGVPVALATGRRLCA
CCCCCCCCHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHH
TRPVLAELGLPLPLVLVNGALVWDAEREEALAERPLARQALARALAEAEREGLGALALRG
CCHHHHHCCCCHHHHHHCCEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHH
LASGERLVLVTDPLPALPEFERELLPRTGELDRLPAAAVVDLPDVLTIDLFGPERALRRA
CCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEECCHHHHHHHH
TARLARAGLPVYHHGPFELIPALPRWVANVHAPGVSKASGVEILARRFGLTLEDVLAVGD
HHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCC
GENDLPLLRRAGLGVAMGNAPDYVRAQADAVVRGHDEDGVAEALERFVLEPWRRARSLA
CCCCCHHHHHCCCCEEECCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]