| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633887
Identifier: 221633887
GI number: 221633887
Start: 1924166
End: 1924633
Strand: Reverse
Name: 221633887
Synonym: trd_1913
Alternate gene names: NA
Gene position: 1924633-1924166 (Counterclockwise)
Preceding gene: 221633888
Following gene: 221633885
Centisome position: 96.09
GC content: 65.6
Gene sequence:
>468_bases ATGCTCCACCCCTATCAGGAACTGATCGATCTCCTCGCCGAGACACCGCGCCGGTTGACCGCCCTGCTCGAGCAGGCCGG TTCCGATGGAGAAGGCCAGCGTGCGCAGCTGGCGCGTGTCGTGGCGCATCTGGCCGCAGTGGAATCCCTGATGCGGGAGC GGATCCTGCGCATGGTCGCGCAGGACACCCCCTACTTCCGGGCTGTCGATCTGAGTGCGCTGGCGGAAACGACGACCTCG CTGCGCGAGGCGCTCGACAAACTAGGACACGAGCGCGGAGACACCTTGACCACGCTCATGACGCTCTCCCTCAAGGACTG GGAGCGACCGGCTATCCACGAGCGGCTCGGCCAGGTCACGGTCGAAGACCTGGTCGAGCAACTGGTCGAACACGACCGGC TCCATCTCGAGCAGGTCGAACGACTCCTCGCCGGTCAGGAGGTGAGTTGGCCACCCGAGCCGAGTTGA
Upstream 100 bases:
>100_bases ACTCGTTCGTCTTCCGCGACCCGTTCGGTCTCACCTGGCACGTGACCGATCTGCCGGCCAGCGAGCCGCCGCACTGAGCC GGTGCACGAAGGAGCCGCCC
Downstream 100 bases:
>100_bases CGGCCGGGCGCCGCTGCCTCGACGAGCGCTAGCACCTCATCCAGCCGGTCACCGGCCGTGATCGCGCGGACGACCGTCTC GTCCAGAACCGTCTCCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MLHPYQELIDLLAETPRRLTALLEQAGSDGEGQRAQLARVVAHLAAVESLMRERILRMVAQDTPYFRAVDLSALAETTTS LREALDKLGHERGDTLTTLMTLSLKDWERPAIHERLGQVTVEDLVEQLVEHDRLHLEQVERLLAGQEVSWPPEPS
Sequences:
>Translated_155_residues MLHPYQELIDLLAETPRRLTALLEQAGSDGEGQRAQLARVVAHLAAVESLMRERILRMVAQDTPYFRAVDLSALAETTTS LREALDKLGHERGDTLTTLMTLSLKDWERPAIHERLGQVTVEDLVEQLVEHDRLHLEQVERLLAGQEVSWPPEPS >Mature_155_residues MLHPYQELIDLLAETPRRLTALLEQAGSDGEGQRAQLARVVAHLAAVESLMRERILRMVAQDTPYFRAVDLSALAETTTS LREALDKLGHERGDTLTTLMTLSLKDWERPAIHERLGQVTVEDLVEQLVEHDRLHLEQVERLLAGQEVSWPPEPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17520; Mature: 17520
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHPYQELIDLLAETPRRLTALLEQAGSDGEGQRAQLARVVAHLAAVESLMRERILRMVA CCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDTPYFRAVDLSALAETTTSLREALDKLGHERGDTLTTLMTLSLKDWERPAIHERLGQVT HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCH VEDLVEQLVEHDRLHLEQVERLLAGQEVSWPPEPS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLHPYQELIDLLAETPRRLTALLEQAGSDGEGQRAQLARVVAHLAAVESLMRERILRMVA CCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDTPYFRAVDLSALAETTTSLREALDKLGHERGDTLTTLMTLSLKDWERPAIHERLGQVT HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCH VEDLVEQLVEHDRLHLEQVERLLAGQEVSWPPEPS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA