| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633855
Identifier: 221633855
GI number: 221633855
Start: 1892039
End: 1892650
Strand: Reverse
Name: 221633855
Synonym: trd_1882
Alternate gene names: NA
Gene position: 1892650-1892039 (Counterclockwise)
Preceding gene: 221633856
Following gene: 221633854
Centisome position: 94.49
GC content: 68.63
Gene sequence:
>612_bases ATGCCCAGGATCCTGCGCCGTCCCCGTTCTCCAACCGAACGCCACCAGCGAGCCGCCGAGTGGGCCCGCTGGTTCACTGG CGACAGCAGCATCGCCGCTTATCGGCGAGAACTCGCGCAGCTGACTGGACTCGGTGCCGATCTCGCCTGGGAACTCGTCA GCGATCTGGCACCGCTCCTGCTCGAGCGCGTTCCGGCGAAACTGGGTGCCCAAGTCCTCTTGGCCACCGTCACGCTCGCA GCAGCACAGCCCAAGCCGCGAGAGGCCGGCTGGGCGCTGCTGGCGACCGTCACCGAAGAACTCACCCCAGCGCATGCCCG TACCGTGCTCGAAACACTGGCCTTGGGCTGGCAGGCGAGCTCCACCGCGCTCACGAGCACGCAGCGCCGTCAGGCGATCG AGCGTGAACTCCGACGCGTGATCCGTCGACTCGCTGCCAGTGGCGCCGCTGGCCTCGATGCGCTCGTTGCGGTCGTCGCT GTCCTGGGCATCTCGGAGGGAGACGACAGCGCTATACTGGAGAGCATCGAGGGGCCTCACCGGGAGCAGGGCCAGGAGGG AGCGGCCCAGCCACCGCAGCCCGGGACAGGGAAGGCGGAGGACGAACGATGA
Upstream 100 bases:
>100_bases GGCCTGGTCTGCAGCCTCGCGCTCCTCTTCGCAACGAGGGCAGTGCGCCGTGCCGCTCTGACGCCGAGCACGACCATGCT TTCTGCTGGCTGACCGACGG
Downstream 100 bases:
>100_bases GCGCGCAGGTTTGGCTCGGTCTCGTGTTCCTCGTGCTCATCGTGATCTGGATCATCGAACTCGTCTGGATCGCTCGTTCG GCGGAAAGCTGGGGACACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MPRILRRPRSPTERHQRAAEWARWFTGDSSIAAYRRELAQLTGLGADLAWELVSDLAPLLLERVPAKLGAQVLLATVTLA AAQPKPREAGWALLATVTEELTPAHARTVLETLALGWQASSTALTSTQRRQAIERELRRVIRRLAASGAAGLDALVAVVA VLGISEGDDSAILESIEGPHREQGQEGAAQPPQPGTGKAEDER
Sequences:
>Translated_203_residues MPRILRRPRSPTERHQRAAEWARWFTGDSSIAAYRRELAQLTGLGADLAWELVSDLAPLLLERVPAKLGAQVLLATVTLA AAQPKPREAGWALLATVTEELTPAHARTVLETLALGWQASSTALTSTQRRQAIERELRRVIRRLAASGAAGLDALVAVVA VLGISEGDDSAILESIEGPHREQGQEGAAQPPQPGTGKAEDER >Mature_202_residues PRILRRPRSPTERHQRAAEWARWFTGDSSIAAYRRELAQLTGLGADLAWELVSDLAPLLLERVPAKLGAQVLLATVTLAA AQPKPREAGWALLATVTEELTPAHARTVLETLALGWQASSTALTSTQRRQAIERELRRVIRRLAASGAAGLDALVAVVAV LGISEGDDSAILESIEGPHREQGQEGAAQPPQPGTGKAEDER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21826; Mature: 21695
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRILRRPRSPTERHQRAAEWARWFTGDSSIAAYRRELAQLTGLGADLAWELVSDLAPLL CCCHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LERVPAKLGAQVLLATVTLAAAQPKPREAGWALLATVTEELTPAHARTVLETLALGWQAS HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC STALTSTQRRQAIERELRRVIRRLAASGAAGLDALVAVVAVLGISEGDDSAILESIEGPH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC REQGQEGAAQPPQPGTGKAEDER HHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRILRRPRSPTERHQRAAEWARWFTGDSSIAAYRRELAQLTGLGADLAWELVSDLAPLL CCHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LERVPAKLGAQVLLATVTLAAAQPKPREAGWALLATVTEELTPAHARTVLETLALGWQAS HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC STALTSTQRRQAIERELRRVIRRLAASGAAGLDALVAVVAVLGISEGDDSAILESIEGPH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC REQGQEGAAQPPQPGTGKAEDER HHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA