Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633807

Identifier: 221633807

GI number: 221633807

Start: 1844019

End: 1844393

Strand: Reverse

Name: 221633807

Synonym: trd_1834

Alternate gene names: NA

Gene position: 1844393-1844019 (Counterclockwise)

Preceding gene: 221633808

Following gene: 221633806

Centisome position: 92.08

GC content: 66.4

Gene sequence:

>375_bases
ATGACTGCCTTACCATTCATCGTCCTGATCGAGCCGGACTGGCCGGCACGCTCCTATTTCCGCGCGGAACTCGAGGAACT
CGGCTACGCCGTGAGCGCGCACGAGCGCGCCGCTGACGCAGCACACTTTCTCGCTGGCTGGGGATTGCGCCCCGACCTGA
TCGTGGTGGACCTCGCGAGTGATGGTGAGCAGCTCGCCGAACTCCAGCGCCTGCTCGAAGACTTCCCTGACACGCGACTC
CTCGTCCTGGCGAGCCCCCTGCGCGCCCTGCCGGAATGGCTGCGCCAGCGCGCGAACCGGATCCTCTCCCGCCCCTTCGC
AGTCAGCGACGTGGTGCGCGTCGTCAGCGAACTCGCCCCGTTAATCGACCGTTAA

Upstream 100 bases:

>100_bases
TGTCCGGATGGCAGAGCGGTCGCTCGTCCTACCTCGAGCGGCCGCTCTCGTCCGTTCACGAGACAGTTGCGTACTGTCTC
GCGAGAGCAGGAGCGAGGCG

Downstream 100 bases:

>100_bases
TCTCCCGCTGATCCTCCGTTAATCGCAGCCCGGTACACTGCCCACAGTGAAGGGAAGACGGATGGTCACGGTGAGCAGTC
GATCGACCACGCGACCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTALPFIVLIEPDWPARSYFRAELEELGYAVSAHERAADAAHFLAGWGLRPDLIVVDLASDGEQLAELQRLLEDFPDTRL
LVLASPLRALPEWLRQRANRILSRPFAVSDVVRVVSELAPLIDR

Sequences:

>Translated_124_residues
MTALPFIVLIEPDWPARSYFRAELEELGYAVSAHERAADAAHFLAGWGLRPDLIVVDLASDGEQLAELQRLLEDFPDTRL
LVLASPLRALPEWLRQRANRILSRPFAVSDVVRVVSELAPLIDR
>Mature_123_residues
TALPFIVLIEPDWPARSYFRAELEELGYAVSAHERAADAAHFLAGWGLRPDLIVVDLASDGEQLAELQRLLEDFPDTRLL
VLASPLRALPEWLRQRANRILSRPFAVSDVVRVVSELAPLIDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13956; Mature: 13825

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALPFIVLIEPDWPARSYFRAELEELGYAVSAHERAADAAHFLAGWGLRPDLIVVDLAS
CCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
DGEQLAELQRLLEDFPDTRLLVLASPLRALPEWLRQRANRILSRPFAVSDVVRVVSELAP
CCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LIDR
HHCC
>Mature Secondary Structure 
TALPFIVLIEPDWPARSYFRAELEELGYAVSAHERAADAAHFLAGWGLRPDLIVVDLAS
CCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
DGEQLAELQRLLEDFPDTRLLVLASPLRALPEWLRQRANRILSRPFAVSDVVRVVSELAP
CCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LIDR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA