Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633710

Identifier: 221633710

GI number: 221633710

Start: 1741779

End: 1742153

Strand: Reverse

Name: 221633710

Synonym: trd_1737

Alternate gene names: NA

Gene position: 1742153-1741779 (Counterclockwise)

Preceding gene: 221633711

Following gene: 221633705

Centisome position: 86.98

GC content: 67.73

Gene sequence:

>375_bases
TTGGCGCGTATCCCGCTCTTCGCGCTCGCGCTGCTGGCGGAGTGGATCCCGCTCCTGGTGACGATCGCGAGCTCGGTCCT
GATCCAGAATGCAAAAGGGCTCGTCATCGCTCCGCTCGTCGAGGGGGAGCGACTCGATGTCCATCCCCTGGCAGCGCTGG
TGGCCGTTCTGTCTGGGGCCGAACTCGGGGGCGTTGCCGGTGCTGCGCTCGCGTTGCCGGTTGTCGTCGTCCTGGACGTG
TTGTGGGACCGATCAGTGAAACCGTGGTTGGTCCGCGGCCGAGCGATCAGCGAGGAGCCGGGGAGCGCGGGGAAAAAAGA
GTGCGGAGACCCCTGCTGCCACGCCGTGACCGGGCGAGCGCGTTCCGGCCAGTAG

Upstream 100 bases:

>100_bases
AGGGACTGCGCTCGTGCTCTGGCCGCTCGGTGTCCCCTCCCCGCTCCTCCTCGGTCTTCTCGTGGCAGTGGGCGAATTCG
TGCCGCGGATCGGACCGTAG

Downstream 100 bases:

>100_bases
AACGCATTCCAGCCAGCCTGCACAGCAGAGCAGAAGCGGAGCGGGGCGGATCGAGCGTGGCCAGCGAAAAGACAGACGCT
CCCGCCCGAGAGCGCGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MARIPLFALALLAEWIPLLVTIASSVLIQNAKGLVIAPLVEGERLDVHPLAALVAVLSGAELGGVAGAALALPVVVVLDV
LWDRSVKPWLVRGRAISEEPGSAGKKECGDPCCHAVTGRARSGQ

Sequences:

>Translated_124_residues
MARIPLFALALLAEWIPLLVTIASSVLIQNAKGLVIAPLVEGERLDVHPLAALVAVLSGAELGGVAGAALALPVVVVLDV
LWDRSVKPWLVRGRAISEEPGSAGKKECGDPCCHAVTGRARSGQ
>Mature_123_residues
ARIPLFALALLAEWIPLLVTIASSVLIQNAKGLVIAPLVEGERLDVHPLAALVAVLSGAELGGVAGAALALPVVVVLDVL
WDRSVKPWLVRGRAISEEPGSAGKKECGDPCCHAVTGRARSGQ

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12818; Mature: 12687

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIPLFALALLAEWIPLLVTIASSVLIQNAKGLVIAPLVEGERLDVHPLAALVAVLSGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC
ELGGVAGAALALPVVVVLDVLWDRSVKPWLVRGRAISEEPGSAGKKECGDPCCHAVTGRA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
RSGQ
CCCC
>Mature Secondary Structure 
ARIPLFALALLAEWIPLLVTIASSVLIQNAKGLVIAPLVEGERLDVHPLAALVAVLSGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC
ELGGVAGAALALPVVVVLDVLWDRSVKPWLVRGRAISEEPGSAGKKECGDPCCHAVTGRA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
RSGQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA