| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633711
Identifier: 221633711
GI number: 221633711
Start: 1742154
End: 1742513
Strand: Reverse
Name: 221633711
Synonym: trd_1738
Alternate gene names: NA
Gene position: 1742513-1742154 (Counterclockwise)
Preceding gene: 221633712
Following gene: 221633710
Centisome position: 86.99
GC content: 67.78
Gene sequence:
>360_bases ATGGCGAGCCAGTGGCTCGCGTCGTTCGCTCGCCAGTCGGTGCTGCTTCCTCGCTGGGCGCTCGCGACGATCCTGGATCT GGTCGCGATCATCGCGCTCAGCAGCGCACTGGTGATGCAGCGGCGGACGCTCTTCGCGTTGCTTCTGGCAGCGATGCCTC CCGCGCAGCGCCCACTGCTGCGCGCCATCGTCGTGGAGATCTGGCGCCGGATCGGCAATGACGTGAGTGCGAAGCTGACC GTGATGGGGATCGTGGGGGTAGGGACTGCGCTCGTGCTCTGGCCGCTCGGTGTCCCCTCCCCGCTCCTCCTCGGTCTTCT CGTGGCAGTGGGCGAATTCGTGCCGCGGATCGGACCGTAG
Upstream 100 bases:
>100_bases GCCTCGACTAGTCGAGCAACTGGTGCGGTTGCGGGCACTGTAGCGCGAACTCCGCGCATCCTATCCGGAACTCGCGCCGG TCGAGCTGCAGCTGGAAGCG
Downstream 100 bases:
>100_bases TTGGCGCGTATCCCGCTCTTCGCGCTCGCGCTGCTGGCGGAGTGGATCCCGCTCCTGGTGACGATCGCGAGCTCGGTCCT GATCCAGAATGCAAAAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MASQWLASFARQSVLLPRWALATILDLVAIIALSSALVMQRRTLFALLLAAMPPAQRPLLRAIVVEIWRRIGNDVSAKLT VMGIVGVGTALVLWPLGVPSPLLLGLLVAVGEFVPRIGP
Sequences:
>Translated_119_residues MASQWLASFARQSVLLPRWALATILDLVAIIALSSALVMQRRTLFALLLAAMPPAQRPLLRAIVVEIWRRIGNDVSAKLT VMGIVGVGTALVLWPLGVPSPLLLGLLVAVGEFVPRIGP >Mature_118_residues ASQWLASFARQSVLLPRWALATILDLVAIIALSSALVMQRRTLFALLLAAMPPAQRPLLRAIVVEIWRRIGNDVSAKLTV MGIVGVGTALVLWPLGVPSPLLLGLLVAVGEFVPRIGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12756; Mature: 12625
Theoretical pI: Translated: 12.41; Mature: 12.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQWLASFARQSVLLPRWALATILDLVAIIALSSALVMQRRTLFALLLAAMPPAQRPLL CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RAIVVEIWRRIGNDVSAKLTVMGIVGVGTALVLWPLGVPSPLLLGLLVAVGEFVPRIGP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ASQWLASFARQSVLLPRWALATILDLVAIIALSSALVMQRRTLFALLLAAMPPAQRPLL CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RAIVVEIWRRIGNDVSAKLTVMGIVGVGTALVLWPLGVPSPLLLGLLVAVGEFVPRIGP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA