| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633601
Identifier: 221633601
GI number: 221633601
Start: 1619094
End: 1619618
Strand: Reverse
Name: 221633601
Synonym: trd_1625
Alternate gene names: NA
Gene position: 1619618-1619094 (Counterclockwise)
Preceding gene: 221633610
Following gene: 221633600
Centisome position: 80.86
GC content: 61.14
Gene sequence:
>525_bases ATGCGCATCAGGCACCTCGAGAACGACACCATCATCAACGTTTCCCAGCTCCTCAAGGCACCGGTCGGTACCGAGCGCTA CTTTACCGTCCATCTCGATCGGCTCGTGCTGGACAGTGACCTCGAGGCTCGCGATCTCACCGCCTCGGTGCGATTGCTGC GGACCTCCAACGGTATCCTGGCGACCGGCCAGCTCCATGTCACGGCGCACCAGACCTGTGTCCGCTGCCTCACCGAGTTC GACGGCCGTTACAGCGAGACCTTCGAAGCCGAGTTCTGGCCGACCGTCGATATCCTCACCGGCCTCCCACTCCCACCTCC ACCGGACGAGGATATCTTTACTATCGACAAGAACCATCACCTCGATTTGCAGGAAATGCTCCGTCAGTATGCGATCCTGG CTATTCCCCTCTATCCGGTCTGTGGTCCCCAGTGCCCTGGGCCGGAGTCGCTCTGGCAGCGTGAGGAAGAGGTGATCGAC GCACGGCTGGCTGTCCTGCAGTCGCTCCTTGACGAACGAGCGTGA
Upstream 100 bases:
>100_bases GGAGCGCAGACGGGGAAAGCCCTTTTGGGCATTCTTGGACGTGCTTGTTACACTTGAAGAGTTGCGCACCCCCCGAGGGA CGCGACCGGAGGGCTGTCCC
Downstream 100 bases:
>100_bases TTGTGCGACAACTTGCACTCAGCATGCAGTGACCTCCTCGCGGAGGAGTTTCGGCATGCACCGAGTCGTCGAACGAGACA TGGAAGGATCGACCTGATGG
Product: ACR protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRIRHLENDTIINVSQLLKAPVGTERYFTVHLDRLVLDSDLEARDLTASVRLLRTSNGILATGQLHVTAHQTCVRCLTEF DGRYSETFEAEFWPTVDILTGLPLPPPPDEDIFTIDKNHHLDLQEMLRQYAILAIPLYPVCGPQCPGPESLWQREEEVID ARLAVLQSLLDERA
Sequences:
>Translated_174_residues MRIRHLENDTIINVSQLLKAPVGTERYFTVHLDRLVLDSDLEARDLTASVRLLRTSNGILATGQLHVTAHQTCVRCLTEF DGRYSETFEAEFWPTVDILTGLPLPPPPDEDIFTIDKNHHLDLQEMLRQYAILAIPLYPVCGPQCPGPESLWQREEEVID ARLAVLQSLLDERA >Mature_174_residues MRIRHLENDTIINVSQLLKAPVGTERYFTVHLDRLVLDSDLEARDLTASVRLLRTSNGILATGQLHVTAHQTCVRCLTEF DGRYSETFEAEFWPTVDILTGLPLPPPPDEDIFTIDKNHHLDLQEMLRQYAILAIPLYPVCGPQCPGPESLWQREEEVID ARLAVLQSLLDERA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19784; Mature: 19784
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRHLENDTIINVSQLLKAPVGTERYFTVHLDRLVLDSDLEARDLTASVRLLRTSNGIL CCCCCCCCCCEECHHHHHCCCCCCCEEEEEEEEHHHCCCCCCHHHHHHHHHEEECCCCEE ATGQLHVTAHQTCVRCLTEFDGRYSETFEAEFWPTVDILTGLPLPPPPDEDIFTIDKNHH EECEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCC LDLQEMLRQYAILAIPLYPVCGPQCPGPESLWQREEEVIDARLAVLQSLLDERA CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIRHLENDTIINVSQLLKAPVGTERYFTVHLDRLVLDSDLEARDLTASVRLLRTSNGIL CCCCCCCCCCEECHHHHHCCCCCCCEEEEEEEEHHHCCCCCCHHHHHHHHHEEECCCCEE ATGQLHVTAHQTCVRCLTEFDGRYSETFEAEFWPTVDILTGLPLPPPPDEDIFTIDKNHH EECEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCC LDLQEMLRQYAILAIPLYPVCGPQCPGPESLWQREEEVIDARLAVLQSLLDERA CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA