| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633600
Identifier: 221633600
GI number: 221633600
Start: 1618788
End: 1619093
Strand: Reverse
Name: 221633600
Synonym: trd_1624
Alternate gene names: NA
Gene position: 1619093-1618788 (Counterclockwise)
Preceding gene: 221633601
Following gene: 221633599
Centisome position: 80.83
GC content: 59.8
Gene sequence:
>306_bases TTGTGCGACAACTTGCACTCAGCATGCAGTGACCTCCTCGCGGAGGAGTTTCGGCATGCACCGAGTCGTCGAACGAGACA TGGAAGGATCGACCTGATGGGCGCTGTACCGAAGCATAAAGTCAGCAAGCGGCGACAAGGATTCCGCGCCGCACACCAGT ACATCGACGTGCCGCCGCTCACCACCTGCCGGACCTGTGGGCAGAAGCATCGTACCCATTACGTCTGCCCACACTGCGGT CATTACCGCGGTCGACTCGTTCTGGATATGGAGAAGAAGAAGCGGCAGCGACGTCCCGAGGCCTGA
Upstream 100 bases:
>100_bases TCCCCAGTGCCCTGGGCCGGAGTCGCTCTGGCAGCGTGAGGAAGAGGTGATCGACGCACGGCTGGCTGTCCTGCAGTCGC TCCTTGACGAACGAGCGTGA
Downstream 100 bases:
>100_bases CGGCGCTGCGGGGCAGGGGGCAGCGCGATGGCGTACCGTGCCGCGATCACCGGGTGGGGTGCTTACGTCCCAGCCCAGGT GCTGACCAACGCCGACCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MCDNLHSACSDLLAEEFRHAPSRRTRHGRIDLMGAVPKHKVSKRRQGFRAAHQYIDVPPLTTCRTCGQKHRTHYVCPHCG HYRGRLVLDMEKKKRQRRPEA
Sequences:
>Translated_101_residues MCDNLHSACSDLLAEEFRHAPSRRTRHGRIDLMGAVPKHKVSKRRQGFRAAHQYIDVPPLTTCRTCGQKHRTHYVCPHCG HYRGRLVLDMEKKKRQRRPEA >Mature_101_residues MCDNLHSACSDLLAEEFRHAPSRRTRHGRIDLMGAVPKHKVSKRRQGFRAAHQYIDVPPLTTCRTCGQKHRTHYVCPHCG HYRGRLVLDMEKKKRQRRPEA
Specific function: Unknown
COG id: COG0333
COG function: function code J; Ribosomal protein L32
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11798; Mature: 11798
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDNLHSACSDLLAEEFRHAPSRRTRHGRIDLMGAVPKHKVSKRRQGFRAAHQYIDVPPL CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC TTCRTCGQKHRTHYVCPHCGHYRGRLVLDMEKKKRQRRPEA HHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHCCCCC >Mature Secondary Structure MCDNLHSACSDLLAEEFRHAPSRRTRHGRIDLMGAVPKHKVSKRRQGFRAAHQYIDVPPL CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC TTCRTCGQKHRTHYVCPHCGHYRGRLVLDMEKKKRQRRPEA HHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA