Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633574

Identifier: 221633574

GI number: 221633574

Start: 1588238

End: 1590706

Strand: Reverse

Name: 221633574

Synonym: trd_1598

Alternate gene names: NA

Gene position: 1590706-1588238 (Counterclockwise)

Preceding gene: 221633575

Following gene: 221633573

Centisome position: 79.42

GC content: 68.61

Gene sequence:

>2469_bases
ATGCAAACCGGACGACGACCGTCGCGGCTCTGGCGCGTTCTCCTGGCACTGGCGCTCGCGGCCAGCAGCCTCGCAGCGCT
CCTGCCGAGCGCGCGAGCGGCCGCGCCGCTCAGCGAGCAGCAGGCGCGCGTCACGCTGGCAGCCGTGTACAACGCCGAAA
CGTTGCCCGGCGGCTTCGGTCCGCTCTGGAGCACCGTCGTCGTGCAGAATCTGGAGGCGCTCCCGATCCAGATTCGCCTG
CGCACTCAGCGGGTCGGTGGCACGATCCGCGGCCCGTACACGCTGGCACCACGGGCCACCCGCGCGTTCACGGCGGCCGA
GCTCGCCGGACTCGGTCTAGTGCCGACCGGTGGGAGCGCTGGCCTGGTGATCGAGGCCGAGTTCCCCGACACGAGCCGCT
CCATCCTGAGCGAGCTGGGCATCTGCACCATCTCGTGCAACCCAGCCATCAGTGTCGTCGCCAAGCATGCTGGGCCGAGC
GCACTCGGCAACGACCTGCGGAGTTCGAGCGCCTTCCAGTTCGTCTCCGGCGCAACCGGCGCGCGCGACGACGACTGGGA
TGCGGCGAACCAGGGCCGCAACTGGGTCCTCCCGGTCGTCCAGACCAACTCCGGCTGGAACACGGTGGTCAAGATCGCCA
ACCTGCGCAACCAGCCGAACCAGGTCACCGTGACGCTGCTGCGCGCGCGGGGCGTCACCGTCGGGAATGCGAGCTACACG
CTCACCCAGACGCTGGCGGCGGGCGAGACCTGGTCGCTGGACCTCGGGAGTGTCGTCCCGCCGGAATGGGTCGGTGCCGC
CTTCATCGATGCCCAGCTGATCGGTGTCGCGGTGGTCGCCGAGCGGTACAAGCCGTCCTGGCGCATGCTCCTGACGAACG
AGGCCGTACCGCGCACGAGCGCGAGCACGCGCTATGCCCCGATCGTCTTCCGCGACTACAACAACTGGAATACCGGGATC
ACGCTGGTAAACCTGGACACGGCCAACACCAACACCCTGACGCTGACCTATTACGACCGCAACGGTCTCGCCCAGGTGGT
CCCGCCCGAACTCTCCACCATCACGCTCCAGCCGGGGGAGAGCGCCTTCATCTATCGGCCGGACATCAGCGCGACCCCGA
GCCTCGATCCCGCCCGGGTCAACGCGGTGGTCATCAGCGGGCAACGCCCGTTCGCAGCAGCGGTGGACGAAGTCAAGTAC
CTGGCTGGTCCGGGTCAAGGGCAGGCGATGAGCTACATCGCGCCCGCAGCGCCGGACGTCGCGGGCAGCAAGCAGAGCTG
GTCGGTGGCCGAGACGCAGGCGCGCACAGCGGGGCAGGTCACCGGCCAGGCCTGGTTCACCCACAGCCTGGCACTGCCGC
TCTTCCAGGTCGGTGACGCCACCGGGCAGGGGGACACGAGCGGGTTCACGCTCTTCAATCCCACCGGTCGCCAGCAACTG
GCCAATGTGCAGATCCTGAGTGCCAACGGCGCGGCAGTCGCTCCCAGCCAGGTGGGGACGAGCGAGAATCCGGTGCTCGT
CGCTGTCCCGGCCGGCGGCTACGCGGTCATCTATCCCTACCCCAGCGACTTCGGCACGACCTTCGCCAGCGTGCCGCGCA
CCTTCACCGGCACGGCGCTCGTCGGCGTGACGGACGGCGCCGGGAGCGGTACCGGCTTCCTGGTGGGGGTATCGAACGTC
GTCAACTACCAGGTGGCTGGTGACGGCTCGGGTGTCTTCGTCCTCACGCCGACCCGCCATCCGGCACTGACCCTTTCGAA
CTTCGCGCTGCGCCTCGAGCCGAGCGTGACGCTCGCAGTCGTCAACCAGGATGTCCCGTTGACCGCGACGCTGACCGCGG
GCGACACCCCGCTCGCGGGACGCACGATCCGCTTCCGGGTGAGCAGCGAGGGAACCCCGAACCCGGTGAGCGGCGTGGCC
GTCACCGATAGCGACGGGCATGCGTCCTTCACCTTCACCAACGGCACGGCCGACCGGACCAACACGGTCACCGCCTGGTG
GGACCTGAACGGTAACGGCGAACAGGACGCGAACGAGCCGGCCGATACGAGCCGCGTCACCTGGGTGAGCAGCCTGACCG
GCACCCTCTCGATCAGCGGATTGACGGGCGGCCCCGGCACGTACCAAGTCCGTGAAGGGGACCTCGCTGGCCCAGCCACC
AAGACGGCCCAGGTCAGCTGCGACCTCGATCCGAACACGCCGACCGGTGTTCCGCTCCTGCTCCGCTTCACCAGCACGGA
CGAAGCCACCACCGCGCGCTGGAGCAGCCAGCCGACCGCTAGCACGTCCGGCACCATCGCCGTGGTGACCAGCGGCGCGA
ACAACGTGGCGACCGCGAACCTGATCCTGGTCGATGGGACTGCTGACAACTCCTACACCGTCACCTGCTACCTCGACTAC
GGCGCGACCGGCGTGCTGGAGAGTACCGATCCATTGCTCGACACCGTCACGATCAACGTGACCAGCTGA

Upstream 100 bases:

>100_bases
CGCTGCGGTGTTTCTGGGAGGCGGAGCCTGCTCGGCCAGGGCAGTCTCCGGTACACTCCTCCTTGCCGAAACGGTCGGAC
GCACGGAAAGGAGGGTCACC

Downstream 100 bases:

>100_bases
CGCAGCGCCTCGCGCATCCGCCCCGGGGCCACGGCCCCGGGGCGGTTTTCTCGGCGAGTGCGCTCGGCTACAATCGCGCC
GGGAGCGCAGGACCCGCTGC

Product: putative hemagglutinin/hemolysin-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 822; Mature: 822

Protein sequence:

>822_residues
MQTGRRPSRLWRVLLALALAASSLAALLPSARAAAPLSEQQARVTLAAVYNAETLPGGFGPLWSTVVVQNLEALPIQIRL
RTQRVGGTIRGPYTLAPRATRAFTAAELAGLGLVPTGGSAGLVIEAEFPDTSRSILSELGICTISCNPAISVVAKHAGPS
ALGNDLRSSSAFQFVSGATGARDDDWDAANQGRNWVLPVVQTNSGWNTVVKIANLRNQPNQVTVTLLRARGVTVGNASYT
LTQTLAAGETWSLDLGSVVPPEWVGAAFIDAQLIGVAVVAERYKPSWRMLLTNEAVPRTSASTRYAPIVFRDYNNWNTGI
TLVNLDTANTNTLTLTYYDRNGLAQVVPPELSTITLQPGESAFIYRPDISATPSLDPARVNAVVISGQRPFAAAVDEVKY
LAGPGQGQAMSYIAPAAPDVAGSKQSWSVAETQARTAGQVTGQAWFTHSLALPLFQVGDATGQGDTSGFTLFNPTGRQQL
ANVQILSANGAAVAPSQVGTSENPVLVAVPAGGYAVIYPYPSDFGTTFASVPRTFTGTALVGVTDGAGSGTGFLVGVSNV
VNYQVAGDGSGVFVLTPTRHPALTLSNFALRLEPSVTLAVVNQDVPLTATLTAGDTPLAGRTIRFRVSSEGTPNPVSGVA
VTDSDGHASFTFTNGTADRTNTVTAWWDLNGNGEQDANEPADTSRVTWVSSLTGTLSISGLTGGPGTYQVREGDLAGPAT
KTAQVSCDLDPNTPTGVPLLLRFTSTDEATTARWSSQPTASTSGTIAVVTSGANNVATANLILVDGTADNSYTVTCYLDY
GATGVLESTDPLLDTVTINVTS

Sequences:

>Translated_822_residues
MQTGRRPSRLWRVLLALALAASSLAALLPSARAAAPLSEQQARVTLAAVYNAETLPGGFGPLWSTVVVQNLEALPIQIRL
RTQRVGGTIRGPYTLAPRATRAFTAAELAGLGLVPTGGSAGLVIEAEFPDTSRSILSELGICTISCNPAISVVAKHAGPS
ALGNDLRSSSAFQFVSGATGARDDDWDAANQGRNWVLPVVQTNSGWNTVVKIANLRNQPNQVTVTLLRARGVTVGNASYT
LTQTLAAGETWSLDLGSVVPPEWVGAAFIDAQLIGVAVVAERYKPSWRMLLTNEAVPRTSASTRYAPIVFRDYNNWNTGI
TLVNLDTANTNTLTLTYYDRNGLAQVVPPELSTITLQPGESAFIYRPDISATPSLDPARVNAVVISGQRPFAAAVDEVKY
LAGPGQGQAMSYIAPAAPDVAGSKQSWSVAETQARTAGQVTGQAWFTHSLALPLFQVGDATGQGDTSGFTLFNPTGRQQL
ANVQILSANGAAVAPSQVGTSENPVLVAVPAGGYAVIYPYPSDFGTTFASVPRTFTGTALVGVTDGAGSGTGFLVGVSNV
VNYQVAGDGSGVFVLTPTRHPALTLSNFALRLEPSVTLAVVNQDVPLTATLTAGDTPLAGRTIRFRVSSEGTPNPVSGVA
VTDSDGHASFTFTNGTADRTNTVTAWWDLNGNGEQDANEPADTSRVTWVSSLTGTLSISGLTGGPGTYQVREGDLAGPAT
KTAQVSCDLDPNTPTGVPLLLRFTSTDEATTARWSSQPTASTSGTIAVVTSGANNVATANLILVDGTADNSYTVTCYLDY
GATGVLESTDPLLDTVTINVTS
>Mature_822_residues
MQTGRRPSRLWRVLLALALAASSLAALLPSARAAAPLSEQQARVTLAAVYNAETLPGGFGPLWSTVVVQNLEALPIQIRL
RTQRVGGTIRGPYTLAPRATRAFTAAELAGLGLVPTGGSAGLVIEAEFPDTSRSILSELGICTISCNPAISVVAKHAGPS
ALGNDLRSSSAFQFVSGATGARDDDWDAANQGRNWVLPVVQTNSGWNTVVKIANLRNQPNQVTVTLLRARGVTVGNASYT
LTQTLAAGETWSLDLGSVVPPEWVGAAFIDAQLIGVAVVAERYKPSWRMLLTNEAVPRTSASTRYAPIVFRDYNNWNTGI
TLVNLDTANTNTLTLTYYDRNGLAQVVPPELSTITLQPGESAFIYRPDISATPSLDPARVNAVVISGQRPFAAAVDEVKY
LAGPGQGQAMSYIAPAAPDVAGSKQSWSVAETQARTAGQVTGQAWFTHSLALPLFQVGDATGQGDTSGFTLFNPTGRQQL
ANVQILSANGAAVAPSQVGTSENPVLVAVPAGGYAVIYPYPSDFGTTFASVPRTFTGTALVGVTDGAGSGTGFLVGVSNV
VNYQVAGDGSGVFVLTPTRHPALTLSNFALRLEPSVTLAVVNQDVPLTATLTAGDTPLAGRTIRFRVSSEGTPNPVSGVA
VTDSDGHASFTFTNGTADRTNTVTAWWDLNGNGEQDANEPADTSRVTWVSSLTGTLSISGLTGGPGTYQVREGDLAGPAT
KTAQVSCDLDPNTPTGVPLLLRFTSTDEATTARWSSQPTASTSGTIAVVTSGANNVATANLILVDGTADNSYTVTCYLDY
GATGVLESTDPLLDTVTINVTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85461; Mature: 85461

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS51127 BIG1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTGRRPSRLWRVLLALALAASSLAALLPSARAAAPLSEQQARVTLAAVYNAETLPGGFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEEEECCCCCCCCCC
PLWSTVVVQNLEALPIQIRLRTQRVGGTIRGPYTLAPRATRAFTAAELAGLGLVPTGGSA
HHHHHHHHHCCCCCEEEEEEEEEECCCEECCCEEECCCCHHHHHHHHHHCCEEEECCCCC
GLVIEAEFPDTSRSILSELGICTISCNPAISVVAKHAGPSALGNDLRSSSAFQFVSGATG
EEEEEECCCCCHHHHHHHCCEEEEECCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCCC
ARDDDWDAANQGRNWVLPVVQTNSGWNTVVKIANLRNQPNQVTVTLLRARGVTVGNASYT
CCCCCCCHHHCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCEEECCCCEE
LTQTLAAGETWSLDLGSVVPPEWVGAAFIDAQLIGVAVVAERYKPSWRMLLTNEAVPRTS
EEEEEECCCEEEEECCCCCCCHHHCHHHHHHHHHHHEEEHHHCCCCEEEEEECCCCCCCC
ASTRYAPIVFRDYNNWNTGITLVNLDTANTNTLTLTYYDRNGLAQVVPPELSTITLQPGE
CCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEECCCCCEEEEECCCC
SAFIYRPDISATPSLDPARVNAVVISGQRPFAAAVDEVKYLAGPGQGQAMSYIAPAAPDV
CEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHEECCCCCCCEEEEECCCCCCC
AGSKQSWSVAETQARTAGQVTGQAWFTHSLALPLFQVGDATGQGDTSGFTLFNPTGRQQL
CCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCEE
ANVQILSANGAAVAPSQVGTSENPVLVAVPAGGYAVIYPYPSDFGTTFASVPRTFTGTAL
CEEEEEECCCCEECHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHCCCCCCCEEE
VGVTDGAGSGTGFLVGVSNVVNYQVAGDGSGVFVLTPTRHPALTLSNFALRLEPSVTLAV
EEEECCCCCCCEEEEEECCEEEEEEECCCCEEEEECCCCCCEEEEECEEEEECCCEEEEE
VNQDVPLTATLTAGDTPLAGRTIRFRVSSEGTPNPVSGVAVTDSDGHASFTFTNGTADRT
EECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCC
NTVTAWWDLNGNGEQDANEPADTSRVTWVSSLTGTLSISGLTGGPGTYQVREGDLAGPAT
CEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCEEEEECCCCCCCCC
KTAQVSCDLDPNTPTGVPLLLRFTSTDEATTARWSSQPTASTSGTIAVVTSGANNVATAN
CEEEEEEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEE
LILVDGTADNSYTVTCYLDYGATGVLESTDPLLDTVTINVTS
EEEEECCCCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEEC
>Mature Secondary Structure
MQTGRRPSRLWRVLLALALAASSLAALLPSARAAAPLSEQQARVTLAAVYNAETLPGGFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEEEECCCCCCCCCC
PLWSTVVVQNLEALPIQIRLRTQRVGGTIRGPYTLAPRATRAFTAAELAGLGLVPTGGSA
HHHHHHHHHCCCCCEEEEEEEEEECCCEECCCEEECCCCHHHHHHHHHHCCEEEECCCCC
GLVIEAEFPDTSRSILSELGICTISCNPAISVVAKHAGPSALGNDLRSSSAFQFVSGATG
EEEEEECCCCCHHHHHHHCCEEEEECCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCCC
ARDDDWDAANQGRNWVLPVVQTNSGWNTVVKIANLRNQPNQVTVTLLRARGVTVGNASYT
CCCCCCCHHHCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCEEECCCCEE
LTQTLAAGETWSLDLGSVVPPEWVGAAFIDAQLIGVAVVAERYKPSWRMLLTNEAVPRTS
EEEEEECCCEEEEECCCCCCCHHHCHHHHHHHHHHHEEEHHHCCCCEEEEEECCCCCCCC
ASTRYAPIVFRDYNNWNTGITLVNLDTANTNTLTLTYYDRNGLAQVVPPELSTITLQPGE
CCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEECCCCCEEEEECCCC
SAFIYRPDISATPSLDPARVNAVVISGQRPFAAAVDEVKYLAGPGQGQAMSYIAPAAPDV
CEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHEECCCCCCCEEEEECCCCCCC
AGSKQSWSVAETQARTAGQVTGQAWFTHSLALPLFQVGDATGQGDTSGFTLFNPTGRQQL
CCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCEE
ANVQILSANGAAVAPSQVGTSENPVLVAVPAGGYAVIYPYPSDFGTTFASVPRTFTGTAL
CEEEEEECCCCEECHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHCCCCCCCEEE
VGVTDGAGSGTGFLVGVSNVVNYQVAGDGSGVFVLTPTRHPALTLSNFALRLEPSVTLAV
EEEECCCCCCCEEEEEECCEEEEEEECCCCEEEEECCCCCCEEEEECEEEEECCCEEEEE
VNQDVPLTATLTAGDTPLAGRTIRFRVSSEGTPNPVSGVAVTDSDGHASFTFTNGTADRT
EECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCC
NTVTAWWDLNGNGEQDANEPADTSRVTWVSSLTGTLSISGLTGGPGTYQVREGDLAGPAT
CEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCEEEEECCCCCCCCC
KTAQVSCDLDPNTPTGVPLLLRFTSTDEATTARWSSQPTASTSGTIAVVTSGANNVATAN
CEEEEEEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEE
LILVDGTADNSYTVTCYLDYGATGVLESTDPLLDTVTINVTS
EEEEECCCCCCEEEEEEECCCCCEEECCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA