Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633573

Identifier: 221633573

GI number: 221633573

Start: 1587739

End: 1588101

Strand: Reverse

Name: 221633573

Synonym: trd_1597

Alternate gene names: NA

Gene position: 1588101-1587739 (Counterclockwise)

Preceding gene: 221633574

Following gene: 221633567

Centisome position: 79.29

GC content: 69.15

Gene sequence:

>363_bases
ATGGCAACCGCACAGCGCCGGTCGTCCGCCCTCTGGGACTACGCGGCGGCCCTGGTGATGGTCCTCGGCCTCTGGCTGGC
CGCCTCGCCCTACGTCATCCCGGATGCCTGGCTCTACGACGTGACGCGGCTGAGCGCCACCTTCTTCGGCGGTTGTATCG
TCATGTTCGCCATCGCTGAACTGGCGCTCTCGCCGGGGCTCCGCTGGGTAGGACTGGCCAACGTGCCGATCGGCCTCTGG
ATCGCTGCGGCCCCCTTCGTGAGCGGCGAGACCGCCGTCTCGGCGATGGTGACCAGCATGGTCGTCGTCGGTATCGCGGT
CGCGATCCTGAGCCTGGCCAGCGTCGTCTTGGCGCGCCGCTGA

Upstream 100 bases:

>100_bases
CCGGGGCGGTTTTCTCGGCGAGTGCGCTCGGCTACAATCGCGCCGGGAGCGCAGGACCCGCTGCGCCGAGTTGGATGGGA
AGGGAGAGGAGCAGCACGCG

Downstream 100 bases:

>100_bases
GCGTGCCGGGCGGCGAGCGCGCCGTGTCGTTTTGCCGCGCCGTCCGGCGCGGGCGGGCGAGGCAGCGCCTCGCCCCTACA
ACGTGGCGCGCTGCATCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MATAQRRSSALWDYAAALVMVLGLWLAASPYVIPDAWLYDVTRLSATFFGGCIVMFAIAELALSPGLRWVGLANVPIGLW
IAAAPFVSGETAVSAMVTSMVVVGIAVAILSLASVVLARR

Sequences:

>Translated_120_residues
MATAQRRSSALWDYAAALVMVLGLWLAASPYVIPDAWLYDVTRLSATFFGGCIVMFAIAELALSPGLRWVGLANVPIGLW
IAAAPFVSGETAVSAMVTSMVVVGIAVAILSLASVVLARR
>Mature_119_residues
ATAQRRSSALWDYAAALVMVLGLWLAASPYVIPDAWLYDVTRLSATFFGGCIVMFAIAELALSPGLRWVGLANVPIGLWI
AAAPFVSGETAVSAMVTSMVVVGIAVAILSLASVVLARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12598; Mature: 12467

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAQRRSSALWDYAAALVMVLGLWLAASPYVIPDAWLYDVTRLSATFFGGCIVMFAIAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LALSPGLRWVGLANVPIGLWIAAAPFVSGETAVSAMVTSMVVVGIAVAILSLASVVLARR
HHHCCCCCEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATAQRRSSALWDYAAALVMVLGLWLAASPYVIPDAWLYDVTRLSATFFGGCIVMFAIAE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LALSPGLRWVGLANVPIGLWIAAAPFVSGETAVSAMVTSMVVVGIAVAILSLASVVLARR
HHHCCCCCEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA