| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is 221633549
Identifier: 221633549
GI number: 221633549
Start: 1557844
End: 1557984
Strand: Reverse
Name: 221633549
Synonym: trd_1573
Alternate gene names: NA
Gene position: 1557984-1557844 (Counterclockwise)
Preceding gene: 221633550
Following gene: 221633547
Centisome position: 77.78
GC content: 67.38
Gene sequence:
>141_bases GTGACGAGTGCCCTGTCGACCGATCAGGCTGGCCAGTGGGCGCCGTCCCGGCCGGTGACGCGTCGTCCTTCTCGGGCACC GGCACTTCTGGCCAATGACCATGTCGGTCGCCTCGTGTCTCGGTTCGCCTGTGTCCAGTGA
Upstream 100 bases:
>100_bases GCTGACGCCCATTCGGTAGCCGGTTGGGTGAGCCAGTGTCCTGGCATGGCGTGCAGCGGTTGGTCATCGGCCAGCGACCG CGCGACTGGGACTGACCTCG
Downstream 100 bases:
>100_bases GGAAAGCAGCGCGCCGGCTCGGTGGGGAGCCGGCTCGCGCGATCGTTCCGCTCGGCAGCGGCGGTCAGTCGTCAGCAGTG AGCTGCTCGACGTCGATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 45
Protein sequence:
>46_residues MTSALSTDQAGQWAPSRPVTRRPSRAPALLANDHVGRLVSRFACVQ
Sequences:
>Translated_46_residues MTSALSTDQAGQWAPSRPVTRRPSRAPALLANDHVGRLVSRFACVQ >Mature_45_residues TSALSTDQAGQWAPSRPVTRRPSRAPALLANDHVGRLVSRFACVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4977; Mature: 4846
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSALSTDQAGQWAPSRPVTRRPSRAPALLANDHVGRLVSRFACVQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TSALSTDQAGQWAPSRPVTRRPSRAPALLANDHVGRLVSRFACVQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA