Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633487

Identifier: 221633487

GI number: 221633487

Start: 1489429

End: 1490277

Strand: Reverse

Name: 221633487

Synonym: trd_1509

Alternate gene names: NA

Gene position: 1490277-1489429 (Counterclockwise)

Preceding gene: 221633488

Following gene: 221633486

Centisome position: 74.4

GC content: 65.14

Gene sequence:

>849_bases
ATGCGACGGTGGTGGCGGCGCGATCGTGACCAGGATGAACGACCAGCCGTAGACCGACCGACCAACCAGCCCGAGCGGCC
GGTCCGGGAGGCAGAGCGCCGACGCCTGGCTCGCCTGTACCAGCGTCGTGAAGAGTTGCGCTACGACCTCATGCTCGCTG
AGCAGGCTCGCCAACCGGAGAACCGCTGGACAGAACGTCTTCGCGAACTCGATGCGGCGATCGCTGACCTCGACGAACAG
CGAAAAGCATTGGAGACGGCGCCCCCCGTCCTTCAGCTACAGCCCCTCCCGCCTGTTCCGGTCGAAGTGAGGGTCGATCT
GCAAGCATCGCCCGTGACGGTCGAATTGGAGATCAGCGGTGTCGTTCTCCGCTGGATCGAGGAAGTCGACTGGGCTGAGC
GTGGTCACCAGATAGCACCGGCCCAGCTCCGGCGTGTGGAGGACGAACTCGAGAAGGTATTGGCAGCAGTGGGGTACCGC
GATCCGAGTCCTGAGCTCCTCGCGACCCTTGCGGCGAGTGCCGATCTCGTGGCGGCTGATGCGCTGGAGACAGTGCGACG
TCGGCAAGTCTGGACGGACATCCGGCTCGACGATCTGGCGCGACCGTGTCCCGCCTGCGGTGGCTGGCGAGACCTGCGTG
ACCGCTGTCCGACATGCGCCGCACGCGCCTGGCAAGTGCAACAACTGATCCTGGAGCGCAACCGGCTGCGGCGCGAGCGG
GATGAGGTTTTCCGCGATTGGCAGCGCGCACGTGACCGCTTGCCGATCATCCAGCGTCAGCTCGCGGAAGTGGAAGCGGA
CATTCGCCAACTCGAAGAAAAGGGCGTTCGTCTGTCCAGCGACGGATGA

Upstream 100 bases:

>100_bases
CCGCCTGAAGCGCTCTTCGCCGGCCCGTCGCCTTTCCCCGCTCTCTTGCACCGCTTGCGCGCCGCGGCGGATGCGCTCGA
GCCGGTGGGGGAGGAATGAC

Downstream 100 bases:

>100_bases
GTTCTCGCTTGCTCGTCAGTTTGCTCGGTGATCCTGGAGACGATCGGCTATACTGCCGGTACGGGATTCCCTGTCACGGC
CAGGCAGACGGTCGGGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MRRWWRRDRDQDERPAVDRPTNQPERPVREAERRRLARLYQRREELRYDLMLAEQARQPENRWTERLRELDAAIADLDEQ
RKALETAPPVLQLQPLPPVPVEVRVDLQASPVTVELEISGVVLRWIEEVDWAERGHQIAPAQLRRVEDELEKVLAAVGYR
DPSPELLATLAASADLVAADALETVRRRQVWTDIRLDDLARPCPACGGWRDLRDRCPTCAARAWQVQQLILERNRLRRER
DEVFRDWQRARDRLPIIQRQLAEVEADIRQLEEKGVRLSSDG

Sequences:

>Translated_282_residues
MRRWWRRDRDQDERPAVDRPTNQPERPVREAERRRLARLYQRREELRYDLMLAEQARQPENRWTERLRELDAAIADLDEQ
RKALETAPPVLQLQPLPPVPVEVRVDLQASPVTVELEISGVVLRWIEEVDWAERGHQIAPAQLRRVEDELEKVLAAVGYR
DPSPELLATLAASADLVAADALETVRRRQVWTDIRLDDLARPCPACGGWRDLRDRCPTCAARAWQVQQLILERNRLRRER
DEVFRDWQRARDRLPIIQRQLAEVEADIRQLEEKGVRLSSDG
>Mature_282_residues
MRRWWRRDRDQDERPAVDRPTNQPERPVREAERRRLARLYQRREELRYDLMLAEQARQPENRWTERLRELDAAIADLDEQ
RKALETAPPVLQLQPLPPVPVEVRVDLQASPVTVELEISGVVLRWIEEVDWAERGHQIAPAQLRRVEDELEKVLAAVGYR
DPSPELLATLAASADLVAADALETVRRRQVWTDIRLDDLARPCPACGGWRDLRDRCPTCAARAWQVQQLILERNRLRRER
DEVFRDWQRARDRLPIIQRQLAEVEADIRQLEEKGVRLSSDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33150; Mature: 33150

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWWRRDRDQDERPAVDRPTNQPERPVREAERRRLARLYQRREELRYDLMLAEQARQPE
CCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
NRWTERLRELDAAIADLDEQRKALETAPPVLQLQPLPPVPVEVRVDLQASPVTVELEISG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEECH
VVLRWIEEVDWAERGHQIAPAQLRRVEDELEKVLAAVGYRDPSPELLATLAASADLVAAD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ALETVRRRQVWTDIRLDDLARPCPACGGWRDLRDRCPTCAARAWQVQQLILERNRLRRER
HHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DEVFRDWQRARDRLPIIQRQLAEVEADIRQLEEKGVRLSSDG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRRWWRRDRDQDERPAVDRPTNQPERPVREAERRRLARLYQRREELRYDLMLAEQARQPE
CCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
NRWTERLRELDAAIADLDEQRKALETAPPVLQLQPLPPVPVEVRVDLQASPVTVELEISG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEECH
VVLRWIEEVDWAERGHQIAPAQLRRVEDELEKVLAAVGYRDPSPELLATLAASADLVAAD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ALETVRRRQVWTDIRLDDLARPCPACGGWRDLRDRCPTCAARAWQVQQLILERNRLRRER
HHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DEVFRDWQRARDRLPIIQRQLAEVEADIRQLEEKGVRLSSDG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA