Click here to switch to the map view.

The map label for this gene is yfiS [H]

Identifier: 221633486

GI number: 221633486

Start: 1488057

End: 1489322

Strand: Reverse

Name: yfiS [H]

Synonym: trd_1508

Alternate gene names: 221633486

Gene position: 1489322-1488057 (Counterclockwise)

Preceding gene: 221633487

Following gene: 221633485

Centisome position: 74.35

GC content: 64.77

Gene sequence:

>1266_bases
GTGGAGTGGCGCGAGCCGCTGCGGCTGCTGGTGGGGAACCGGCGGTTCGCGGCATTATGGGGCTCCGATCTGGTCGCGAC
CATGGGTGACCGGGTACACCGGGTCGCTCTCGCGGCACTGGTGTACGAACTGACGGGGTCGATGACCGTCGCTGGCCTGG
CGTTTTTGGCCAGCGGATTGCCGGATCTCTTGCTCGGGCCGCTCGCTGGTGTGGTGGTGGACCGGGTCGATCGGCGGCGT
GTGATGATCGCTTCGGATTTGGCTCGTGTTCTGCCGGTCGTTCTTCTCCCGATCGCGGCCGAATACTGGATCGGCAGTCT
CTACCTGCTCCTGTTCATGATCAATGCTGCCTCGATCCTGCACCGGCCAGCCAAGATGGCCTCCATTCCAGCGGTCGTGC
CACCGAGCCAGCTCACGACGGCGAACTCTCTGTCGTCGCTTGCCGAGAGCCTCGGTGACATCGGCGGATATCCGCTGGCC
GGGCTGGTCGTCGGTGGGCTCGTGTCGGTGATGGGTAATCGGCATGGCCTGGAAGCTGCTTTTGCGGTCGCTGCACTCGG
CTACGTCGTCTCGGCGCTGATCCTGTGGCCCCTTCGGCTACCGCCCCTCGTGGTGGGGAGCGACCGGTCCGTTCGAGTGG
TCTGGCGCGAGCTGGTCGGCGGAGTGCGGTTCTTGGTCGATCAGCCGCTCGTTCGCACCAACACGCTGCTCGTCGCACTC
GGTGCGATCGCGATCGGTATGGCCATGCCGCTCTTGGTCGGCTACGCCTACGCTCGTCCGGAGCGCGGCGAGGTGACTTA
TAGCCTGCTCAACTTCGGGATCGGCGTGGGGAGTGTCGCGGGTGCGCTCTTGGTCGGCACGCTCAATACGCGGCGCCTCG
CGACGCTCGTCGTACTCGGTCTGGTGGTCATGGGAACTGGCTTGACTGGACTGGGCCTCGAGCCACCGCTCTGGGTCGGT
GTCATGCTGACTGGGCTCACTGGACTCGGGAATCTCCTGTTCCTGGTACCGAGTGTGACGATCGTGCAGCGTGTGACTCC
CGCGAACCTCATGGGACGAGTTTTCGCTCTTCGGTCAACGATCCTGTTCACCGCGCTCATCGCTGCGAACGGTCTAGGTG
GTTGGCTCGGTGATGACCTCGGTGCCGGGCGTGCGTTTTTGGTAGTCGGGAGCGGGCTGATCATCATGACCGTCGCGCTG
TCGCTGCTTCCGGCGACCCGGCAGGCCGACCGACTCGATGATCTCATGCTCGAGCCATCCGGGTAA

Upstream 100 bases:

>100_bases
GCTTGCTCGTCAGTTTGCTCGGTGATCCTGGAGACGATCGGCTATACTGCCGGTACGGGATTCCCTGTCACGGCCAGGCA
GACGGTCGGGGAGGGGAAGG

Downstream 100 bases:

>100_bases
TGGATATACTTGCACGATGTGGTCTGGAGGTTGTGTGTGCCGGAGCATCCACTCGCTCGTTACGTCTATGAACTCTTCGT
CGAGCGACGGCTGACGCTGG

Product: putative membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MEWREPLRLLVGNRRFAALWGSDLVATMGDRVHRVALAALVYELTGSMTVAGLAFLASGLPDLLLGPLAGVVVDRVDRRR
VMIASDLARVLPVVLLPIAAEYWIGSLYLLLFMINAASILHRPAKMASIPAVVPPSQLTTANSLSSLAESLGDIGGYPLA
GLVVGGLVSVMGNRHGLEAAFAVAALGYVVSALILWPLRLPPLVVGSDRSVRVVWRELVGGVRFLVDQPLVRTNTLLVAL
GAIAIGMAMPLLVGYAYARPERGEVTYSLLNFGIGVGSVAGALLVGTLNTRRLATLVVLGLVVMGTGLTGLGLEPPLWVG
VMLTGLTGLGNLLFLVPSVTIVQRVTPANLMGRVFALRSTILFTALIAANGLGGWLGDDLGAGRAFLVVGSGLIIMTVAL
SLLPATRQADRLDDLMLEPSG

Sequences:

>Translated_421_residues
MEWREPLRLLVGNRRFAALWGSDLVATMGDRVHRVALAALVYELTGSMTVAGLAFLASGLPDLLLGPLAGVVVDRVDRRR
VMIASDLARVLPVVLLPIAAEYWIGSLYLLLFMINAASILHRPAKMASIPAVVPPSQLTTANSLSSLAESLGDIGGYPLA
GLVVGGLVSVMGNRHGLEAAFAVAALGYVVSALILWPLRLPPLVVGSDRSVRVVWRELVGGVRFLVDQPLVRTNTLLVAL
GAIAIGMAMPLLVGYAYARPERGEVTYSLLNFGIGVGSVAGALLVGTLNTRRLATLVVLGLVVMGTGLTGLGLEPPLWVG
VMLTGLTGLGNLLFLVPSVTIVQRVTPANLMGRVFALRSTILFTALIAANGLGGWLGDDLGAGRAFLVVGSGLIIMTVAL
SLLPATRQADRLDDLMLEPSG
>Mature_421_residues
MEWREPLRLLVGNRRFAALWGSDLVATMGDRVHRVALAALVYELTGSMTVAGLAFLASGLPDLLLGPLAGVVVDRVDRRR
VMIASDLARVLPVVLLPIAAEYWIGSLYLLLFMINAASILHRPAKMASIPAVVPPSQLTTANSLSSLAESLGDIGGYPLA
GLVVGGLVSVMGNRHGLEAAFAVAALGYVVSALILWPLRLPPLVVGSDRSVRVVWRELVGGVRFLVDQPLVRTNTLLVAL
GAIAIGMAMPLLVGYAYARPERGEVTYSLLNFGIGVGSVAGALLVGTLNTRRLATLVVLGLVVMGTGLTGLGLEPPLWVG
VMLTGLTGLGNLLFLVPSVTIVQRVTPANLMGRVFALRSTILFTALIAANGLGGWLGDDLGAGRAFLVVGSGLIIMTVAL
SLLPATRQADRLDDLMLEPSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44107; Mature: 44107

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWREPLRLLVGNRRFAALWGSDLVATMGDRVHRVALAALVYELTGSMTVAGLAFLASGL
CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PDLLLGPLAGVVVDRVDRRRVMIASDLARVLPVVLLPIAAEYWIGSLYLLLFMINAASIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRPAKMASIPAVVPPSQLTTANSLSSLAESLGDIGGYPLAGLVVGGLVSVMGNRHGLEAA
HCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHH
FAVAALGYVVSALILWPLRLPPLVVGSDRSVRVVWRELVGGVRFLVDQPLVRTNTLLVAL
HHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GAIAIGMAMPLLVGYAYARPERGEVTYSLLNFGIGVGSVAGALLVGTLNTRRLATLVVLG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH
LVVMGTGLTGLGLEPPLWVGVMLTGLTGLGNLLFLVPSVTIVQRVTPANLMGRVFALRST
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHH
ILFTALIAANGLGGWLGDDLGAGRAFLVVGSGLIIMTVALSLLPATRQADRLDDLMLEPS
HHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC
G
C
>Mature Secondary Structure
MEWREPLRLLVGNRRFAALWGSDLVATMGDRVHRVALAALVYELTGSMTVAGLAFLASGL
CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PDLLLGPLAGVVVDRVDRRRVMIASDLARVLPVVLLPIAAEYWIGSLYLLLFMINAASIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRPAKMASIPAVVPPSQLTTANSLSSLAESLGDIGGYPLAGLVVGGLVSVMGNRHGLEAA
HCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHH
FAVAALGYVVSALILWPLRLPPLVVGSDRSVRVVWRELVGGVRFLVDQPLVRTNTLLVAL
HHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GAIAIGMAMPLLVGYAYARPERGEVTYSLLNFGIGVGSVAGALLVGTLNTRRLATLVVLG
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH
LVVMGTGLTGLGLEPPLWVGVMLTGLTGLGNLLFLVPSVTIVQRVTPANLMGRVFALRST
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHH
ILFTALIAANGLGGWLGDDLGAGRAFLVVGSGLIIMTVALSLLPATRQADRLDDLMLEPS
HHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]