Click here to switch to the map view.

The map label for this gene is cinA [H]

Identifier: 221633485

GI number: 221633485

Start: 1487520

End: 1488020

Strand: Reverse

Name: cinA [H]

Synonym: trd_1507

Alternate gene names: 221633485

Gene position: 1488020-1487520 (Counterclockwise)

Preceding gene: 221633486

Following gene: 221633484

Centisome position: 74.29

GC content: 63.87

Gene sequence:

>501_bases
GTGCCGGAGCATCCACTCGCTCGTTACGTCTATGAACTCTTCGTCGAGCGACGGCTGACGCTGGCAACCGCCGAATCGTG
CACGGGTGGGCTGATCGGCCATCTCCTCACTTCGGTACCAGGGAGCAGCGAATACTATATCGGTGGGGTCATCGCCTACA
GTAACCGCGTGAAGCAAGCGCTGCTCGGTGTTCCGGAACAAGTGCTCCGTTCCGTCGGTGCCGTGAGCCGCGAATGTGCC
GAGGCGATGGCGAAGGGAGCACGAGAGCGCTTCGCAACCGACTACGCGGTCGCCACGACCGGCATCGCTGGCCCCGGTGG
TGGGACAGCGACGAAGCCGGTCGGACTGGTCTACGTTGCCTGCGCGGGGCCGCATGGTGTCGTGGTCGAAGAGCATCGAT
TCACTGGTGACCGCTGGCAGAACATCGAGCTGTCGGCGGAAGCGGCGCTCCGGCTGCTGCTCGATCAAGTTCAGGTCGCC
GATCGATCGGCGATGAGGTAG

Upstream 100 bases:

>100_bases
GCTGCTTCCGGCGACCCGGCAGGCCGACCGACTCGATGATCTCATGCTCGAGCCATCCGGGTAATGGATATACTTGCACG
ATGTGGTCTGGAGGTTGTGT

Downstream 100 bases:

>100_bases
GAAACGGGTAAGGATGGATTACCAGAAGACGTGCCTGCCCAACGGGATTCGTATCGTGACCAGCCGGATGCCCCATGTGC
GCTCGGCGACGGTCATCGTG

Product: competence/damage-inducible protein CinA C-terminal domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MPEHPLARYVYELFVERRLTLATAESCTGGLIGHLLTSVPGSSEYYIGGVIAYSNRVKQALLGVPEQVLRSVGAVSRECA
EAMAKGARERFATDYAVATTGIAGPGGGTATKPVGLVYVACAGPHGVVVEEHRFTGDRWQNIELSAEAALRLLLDQVQVA
DRSAMR

Sequences:

>Translated_166_residues
MPEHPLARYVYELFVERRLTLATAESCTGGLIGHLLTSVPGSSEYYIGGVIAYSNRVKQALLGVPEQVLRSVGAVSRECA
EAMAKGARERFATDYAVATTGIAGPGGGTATKPVGLVYVACAGPHGVVVEEHRFTGDRWQNIELSAEAALRLLLDQVQVA
DRSAMR
>Mature_165_residues
PEHPLARYVYELFVERRLTLATAESCTGGLIGHLLTSVPGSSEYYIGGVIAYSNRVKQALLGVPEQVLRSVGAVSRECAE
AMAKGARERFATDYAVATTGIAGPGGGTATKPVGLVYVACAGPHGVVVEEHRFTGDRWQNIELSAEAALRLLLDQVQVAD
RSAMR

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=134, Percent_Identity=41.7910447761194, Blast_Score=99, Evalue=1e-22,
Organism=Escherichia coli, GI1787818, Length=115, Percent_Identity=35.6521739130435, Blast_Score=76, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 17688; Mature: 17557

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEHPLARYVYELFVERRLTLATAESCTGGLIGHLLTSVPGSSEYYIGGVIAYSNRVKQA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
LLGVPEQVLRSVGAVSRECAEAMAKGARERFATDYAVATTGIAGPGGGTATKPVGLVYVA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEE
CAGPHGVVVEEHRFTGDRWQNIELSAEAALRLLLDQVQVADRSAMR
ECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEHPLARYVYELFVERRLTLATAESCTGGLIGHLLTSVPGSSEYYIGGVIAYSNRVKQA
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
LLGVPEQVLRSVGAVSRECAEAMAKGARERFATDYAVATTGIAGPGGGTATKPVGLVYVA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEE
CAGPHGVVVEEHRFTGDRWQNIELSAEAALRLLLDQVQVADRSAMR
ECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA