| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633478
Identifier: 221633478
GI number: 221633478
Start: 1481582
End: 1481707
Strand: Reverse
Name: 221633478
Synonym: trd_1500
Alternate gene names: NA
Gene position: 1481707-1481582 (Counterclockwise)
Preceding gene: 221633484
Following gene: 221633477
Centisome position: 73.97
GC content: 69.05
Gene sequence:
>126_bases GTGCCGGTGCAGCCGTCGGCGTGCGCGGCGCAGCTGCAGGGGTTGCTGGACGTGTCGGAGTCGGGGTTGCACTACCGCCT CGGCAAGCCGGAAGTGCGACCAGGAGAAGCGCGACGACACAAGTGA
Upstream 100 bases:
>100_bases GTAAGAACAGGAGACGCGGTTGGCGTAGATGTGGGCGTCCGCGCTGGTGTTGCAGCTGGGGTACGAGCCGGTGTTGCTGC GGGGGAGACAGCTGGCGTCC
Downstream 100 bases:
>100_bases GTGTGATGAGCGTTCCTTTCGACCATGTCGCCTCCATCGACACCTCCTAACCCCGTGTCCGACGATACCGAGCGAGACAC CCGAACCGATCGGCTGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 40
Protein sequence:
>41_residues MPVQPSACAAQLQGLLDVSESGLHYRLGKPEVRPGEARRHK
Sequences:
>Translated_41_residues MPVQPSACAAQLQGLLDVSESGLHYRLGKPEVRPGEARRHK >Mature_40_residues PVQPSACAAQLQGLLDVSESGLHYRLGKPEVRPGEARRHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4483; Mature: 4352
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVQPSACAAQLQGLLDVSESGLHYRLGKPEVRPGEARRHK CCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure PVQPSACAAQLQGLLDVSESGLHYRLGKPEVRPGEARRHK CCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA