| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633476
Identifier: 221633476
GI number: 221633476
Start: 1480349
End: 1480690
Strand: Reverse
Name: 221633476
Synonym: trd_1498
Alternate gene names: NA
Gene position: 1480690-1480349 (Counterclockwise)
Preceding gene: 221633477
Following gene: 221633475
Centisome position: 73.92
GC content: 63.74
Gene sequence:
>342_bases GTGGCGCTGGACACTGGCTTACCGGCAGGCTTGTTACTCGCTAGTCTTCTCGGTAGCATGCTGGGGTTAGGCTGGCATGC GGTGTTTGGTCGGCGGATCTGGCAACTCCCGCTCTACTGGTTGGGTGGTGTGCTCGGTTTTGGGATCGGGTCTGTCGCGA GCCAGCTGCTCGGAATGGTTCTCTACCGGCTGGGCACTGTGCCGTTGGTCGAGGGAGGACTCGGTGCACTGTTCGTTCTC GGGATCCTCTGGCTCGTGACGACGCCAGCTGAAGCGGCCCGCTCTCGTCGAGCGAGGCAGCGCGTCCGACGGAACGGCGA TCGATCGTCGGGGGAGGGATAG
Upstream 100 bases:
>100_bases GGAAGTGGAATGGCCACAGCACCCGAAGAATCCCCGACCCGACAAGGTACCGCGGGCAGTGTATGCCTTTTGGATTCGAG TCTCCTGAACGGTCGAAACA
Downstream 100 bases:
>100_bases GGGATGCGGCGCGGCTGGTTGTGGGTGATCGTCGGTGGCTTGCTCGCGATCTTCGTCGTGCTGTTCGTCGTCTTGTATCT GTTGGGCGGGCCGGAGCAGT
Product: putative membrane protein mmpL7
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MALDTGLPAGLLLASLLGSMLGLGWHAVFGRRIWQLPLYWLGGVLGFGIGSVASQLLGMVLYRLGTVPLVEGGLGALFVL GILWLVTTPAEAARSRRARQRVRRNGDRSSGEG
Sequences:
>Translated_113_residues MALDTGLPAGLLLASLLGSMLGLGWHAVFGRRIWQLPLYWLGGVLGFGIGSVASQLLGMVLYRLGTVPLVEGGLGALFVL GILWLVTTPAEAARSRRARQRVRRNGDRSSGEG >Mature_112_residues ALDTGLPAGLLLASLLGSMLGLGWHAVFGRRIWQLPLYWLGGVLGFGIGSVASQLLGMVLYRLGTVPLVEGGLGALFVLG ILWLVTTPAEAARSRRARQRVRRNGDRSSGEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11984; Mature: 11853
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDTGLPAGLLLASLLGSMLGLGWHAVFGRRIWQLPLYWLGGVLGFGIGSVASQLLGMV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYRLGTVPLVEGGLGALFVLGILWLVTTPAEAARSRRARQRVRRNGDRSSGEG HHHHCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ALDTGLPAGLLLASLLGSMLGLGWHAVFGRRIWQLPLYWLGGVLGFGIGSVASQLLGMV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYRLGTVPLVEGGLGALFVLGILWLVTTPAEAARSRRARQRVRRNGDRSSGEG HHHHCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA