Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633011

Identifier: 221633011

GI number: 221633011

Start: 989999

End: 991777

Strand: Reverse

Name: 221633011

Synonym: trd_1026

Alternate gene names: NA

Gene position: 991777-989999 (Counterclockwise)

Preceding gene: 221633013

Following gene: 221633010

Centisome position: 49.51

GC content: 60.76

Gene sequence:

>1779_bases
GTGTTTCCGAGCCGAACACGGGTTCGTCCACGACGGCTCGAGCGCCGTCTTCCCTGGCCGGTGAGCTTGGCGGGACTCCT
GATCCCGCTCGTTCTCTCGGTGCTCACGGCTGCCTATGTCTTGTGGTTTCGCGATGATCGAACAGAAGTGGTCGTGGTGG
ATCGGGTAACTGGTACGCCGATCGCGGGGGCGGTCATCGAAACTGACGGTGCTGCGTTGCAAACGGATCGTACTGGGCGT
GCTCGGCTCTCGGTACGGGCACAGGAGACAATCCGAGTCAGTGCACCGGACCACGATGCGGTTCTCCTGAAGCTGGACCA
AGAGCGCGTGCGACGTGTCCGCATCGAGCTGCGGCCTAATGTCGTTACAGGATCGGTGACGCGGAGCGGTGACGGGGCAC
CGATCGCGGGTGCCACCGTCCGAGCAGTGAAGGCCGGGGCGACGATCGTGACTGCGGAATCGGATACTCGCGGACAGTAT
CTCTTGCGTGGCGTTCCCGAGGGGGCCGAGATCCGCATCGAGCATCCGGACTATGCGCCAATGGTCGTCATGCTCGCGAA
CGACCAGACACGCTTGGATGCCGTCTTGCGACCGGATGTGGTGCTCGGCATCGTGCGGGACACAACTGGCCGGCCGGTAC
GGGCGCTGGTCGCAGCGGCGCGGGGATGGGTCGAGACGGGCGAGGATGGATCCTTCCGATTGAAAGGGGTTTCTGTTGGT
GACCAAGTCTTCGTCAAAGCTCCTGGTTTTCGTGCCGCCGTCTTGACCGTTCCGGAAAACTTTCGACTCGACGTTTCGCT
GGAGCCAATCGTGATCCGCGCTATCTACATCAATGCTCTGGTCGCTGCAAAACCGGAGTCGCTCGAGAAACGGCTTCAGC
TCGTCGATCGAACCGAGTTGAACGCGGTCGTCATCGATCTCAAGGATAGTACGGGACAGGTTTATTATGACACGCGCGTC
GAGCTGGCTCGCGACATCGGTGCGGTGCGTCCGATCCTGGATCCGGCGAAGCTGGTCAAGGACTTGAAGGCGCGCGGAAT
CTACACCATCGCTCGGATCGTCGTTTTCGAGGATCCGATCCTGGCTGAGGCTCGGCCGGAATGGGCAATCAAGGACCAGA
CGACCGGGCAGGCTTGGCGGACCTGGAACGGCTTGGCATGGGTCAATGCGTATCGCCAGGAAGTGTGGAACTACAACATC
GCGCTCGCGGTCGAGGCAGCAGCGATGGGGTTCGACGAGATCCAGCTCGACTACATCCGCTTCCCAACGGACGGTCCCTT
GCAGAAGGCCGATTACGGTGTTGCCCACACTGCGGAGAACCGGACGGCAGCGATCGGTGCATTCTTGCGGAGCGCGCACG
AAGCGCTCTTGCCGACGCCGGCGTATCTCGCCGCAGACATTTTCGGACTGACGATGTGGGAACTGGGTGACAGTGGTATC
GGACAAAATCTGGAAGCGGTGGCCGGGGTGGTCGATTACGTTTGCCCGATGCTCTATCCCTCGCACTTCTGGAGCGGATC
GCTCGGATACGAGTTGCCGAATGACCATCCGTACGAAGTGATGCGGTACAGTCTCGAGAATGGGCTGAAGCGCGTTCCAG
AGGCTCGTGCCAAGTTCCGACCGTGGTTGCAAGATTTTTCGTACGGACGTGGCAAACCATACGGACCGGATGAGGTACGT
GCCCAAATTCGAGCGGTGTACGATGCTGGGCTCAGTTCGTGGATGTTGTGGAACGCAGACAGTGTCTACCAGGAAGCGGC
GCTCGAGACGAGTGGATGA

Upstream 100 bases:

>100_bases
AAGAGCGATCGCACGGTCACGATCCGCTGCTGGACCTGTGGCATACTGCGCCGCAACAGAAAGCAGCGTGCGGGATGGGG
CGGAGAACGGAGCTGGGAGC

Downstream 100 bases:

>100_bases
ACGACCGATGGCGTGGTCGTCAGGAGATTCGGTTCATGCGACACTATCGGTTCTGCGTGACCTCATGGTCACTGCGCGTC
CCCGGCAATGGTTGAAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MFPSRTRVRPRRLERRLPWPVSLAGLLIPLVLSVLTAAYVLWFRDDRTEVVVVDRVTGTPIAGAVIETDGAALQTDRTGR
ARLSVRAQETIRVSAPDHDAVLLKLDQERVRRVRIELRPNVVTGSVTRSGDGAPIAGATVRAVKAGATIVTAESDTRGQY
LLRGVPEGAEIRIEHPDYAPMVVMLANDQTRLDAVLRPDVVLGIVRDTTGRPVRALVAAARGWVETGEDGSFRLKGVSVG
DQVFVKAPGFRAAVLTVPENFRLDVSLEPIVIRAIYINALVAAKPESLEKRLQLVDRTELNAVVIDLKDSTGQVYYDTRV
ELARDIGAVRPILDPAKLVKDLKARGIYTIARIVVFEDPILAEARPEWAIKDQTTGQAWRTWNGLAWVNAYRQEVWNYNI
ALAVEAAAMGFDEIQLDYIRFPTDGPLQKADYGVAHTAENRTAAIGAFLRSAHEALLPTPAYLAADIFGLTMWELGDSGI
GQNLEAVAGVVDYVCPMLYPSHFWSGSLGYELPNDHPYEVMRYSLENGLKRVPEARAKFRPWLQDFSYGRGKPYGPDEVR
AQIRAVYDAGLSSWMLWNADSVYQEAALETSG

Sequences:

>Translated_592_residues
MFPSRTRVRPRRLERRLPWPVSLAGLLIPLVLSVLTAAYVLWFRDDRTEVVVVDRVTGTPIAGAVIETDGAALQTDRTGR
ARLSVRAQETIRVSAPDHDAVLLKLDQERVRRVRIELRPNVVTGSVTRSGDGAPIAGATVRAVKAGATIVTAESDTRGQY
LLRGVPEGAEIRIEHPDYAPMVVMLANDQTRLDAVLRPDVVLGIVRDTTGRPVRALVAAARGWVETGEDGSFRLKGVSVG
DQVFVKAPGFRAAVLTVPENFRLDVSLEPIVIRAIYINALVAAKPESLEKRLQLVDRTELNAVVIDLKDSTGQVYYDTRV
ELARDIGAVRPILDPAKLVKDLKARGIYTIARIVVFEDPILAEARPEWAIKDQTTGQAWRTWNGLAWVNAYRQEVWNYNI
ALAVEAAAMGFDEIQLDYIRFPTDGPLQKADYGVAHTAENRTAAIGAFLRSAHEALLPTPAYLAADIFGLTMWELGDSGI
GQNLEAVAGVVDYVCPMLYPSHFWSGSLGYELPNDHPYEVMRYSLENGLKRVPEARAKFRPWLQDFSYGRGKPYGPDEVR
AQIRAVYDAGLSSWMLWNADSVYQEAALETSG
>Mature_592_residues
MFPSRTRVRPRRLERRLPWPVSLAGLLIPLVLSVLTAAYVLWFRDDRTEVVVVDRVTGTPIAGAVIETDGAALQTDRTGR
ARLSVRAQETIRVSAPDHDAVLLKLDQERVRRVRIELRPNVVTGSVTRSGDGAPIAGATVRAVKAGATIVTAESDTRGQY
LLRGVPEGAEIRIEHPDYAPMVVMLANDQTRLDAVLRPDVVLGIVRDTTGRPVRALVAAARGWVETGEDGSFRLKGVSVG
DQVFVKAPGFRAAVLTVPENFRLDVSLEPIVIRAIYINALVAAKPESLEKRLQLVDRTELNAVVIDLKDSTGQVYYDTRV
ELARDIGAVRPILDPAKLVKDLKARGIYTIARIVVFEDPILAEARPEWAIKDQTTGQAWRTWNGLAWVNAYRQEVWNYNI
ALAVEAAAMGFDEIQLDYIRFPTDGPLQKADYGVAHTAENRTAAIGAFLRSAHEALLPTPAYLAADIFGLTMWELGDSGI
GQNLEAVAGVVDYVCPMLYPSHFWSGSLGYELPNDHPYEVMRYSLENGLKRVPEARAKFRPWLQDFSYGRGKPYGPDEVR
AQIRAVYDAGLSSWMLWNADSVYQEAALETSG

Specific function: Unknown

COG id: COG1306

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65403; Mature: 65403

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPSRTRVRPRRLERRLPWPVSLAGLLIPLVLSVLTAAYVLWFRDDRTEVVVVDRVTGTP
CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCCC
IAGAVIETDGAALQTDRTGRARLSVRAQETIRVSAPDHDAVLLKLDQERVRRVRIELRPN
CCCEEEECCCCEEECCCCCCEEEEEEEEEEEEEECCCCCEEEEEECHHHHHEEEEEECCC
VVTGSVTRSGDGAPIAGATVRAVKAGATIVTAESDTRGQYLLRGVPEGAEIRIEHPDYAP
EEECCEEECCCCCCCCCCCEEEEECCEEEEEECCCCCCCEEEECCCCCCEEEEECCCCCC
MVVMLANDQTRLDAVLRPDVVLGIVRDTTGRPVRALVAAARGWVETGEDGSFRLKGVSVG
EEEEEECCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCC
DQVFVKAPGFRAAVLTVPENFRLDVSLEPIVIRAIYINALVAAKPESLEKRLQLVDRTEL
CEEEEECCCCEEEEEECCCCCEEEEECCCEEEEEEEHHHHHHCCCHHHHHHHHHHCCCCC
NAVVIDLKDSTGQVYYDTRVELARDIGAVRPILDPAKLVKDLKARGIYTIARIVVFEDPI
CEEEEEEECCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEEECCCC
LAEARPEWAIKDQTTGQAWRTWNGLAWVNAYRQEVWNYNIALAVEAAAMGFDEIQLDYIR
CCCCCCCCEECCCCCCCHHHCCCCCHHHHHHHHHHCCCEEEEEEEHHHCCCCCEEEEEEE
FPTDGPLQKADYGVAHTAENRTAAIGAFLRSAHEALLPTPAYLAADIFGLTMWELGDSGI
CCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
GQNLEAVAGVVDYVCPMLYPSHFWSGSLGYELPNDHPYEVMRYSLENGLKRVPEARAKFR
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHH
PWLQDFSYGRGKPYGPDEVRAQIRAVYDAGLSSWMLWNADSVYQEAALETSG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCC
>Mature Secondary Structure
MFPSRTRVRPRRLERRLPWPVSLAGLLIPLVLSVLTAAYVLWFRDDRTEVVVVDRVTGTP
CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCCC
IAGAVIETDGAALQTDRTGRARLSVRAQETIRVSAPDHDAVLLKLDQERVRRVRIELRPN
CCCEEEECCCCEEECCCCCCEEEEEEEEEEEEEECCCCCEEEEEECHHHHHEEEEEECCC
VVTGSVTRSGDGAPIAGATVRAVKAGATIVTAESDTRGQYLLRGVPEGAEIRIEHPDYAP
EEECCEEECCCCCCCCCCCEEEEECCEEEEEECCCCCCCEEEECCCCCCEEEEECCCCCC
MVVMLANDQTRLDAVLRPDVVLGIVRDTTGRPVRALVAAARGWVETGEDGSFRLKGVSVG
EEEEEECCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCC
DQVFVKAPGFRAAVLTVPENFRLDVSLEPIVIRAIYINALVAAKPESLEKRLQLVDRTEL
CEEEEECCCCEEEEEECCCCCEEEEECCCEEEEEEEHHHHHHCCCHHHHHHHHHHCCCCC
NAVVIDLKDSTGQVYYDTRVELARDIGAVRPILDPAKLVKDLKARGIYTIARIVVFEDPI
CEEEEEEECCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEEECCCC
LAEARPEWAIKDQTTGQAWRTWNGLAWVNAYRQEVWNYNIALAVEAAAMGFDEIQLDYIR
CCCCCCCCEECCCCCCCHHHCCCCCHHHHHHHHHHCCCEEEEEEEHHHCCCCCEEEEEEE
FPTDGPLQKADYGVAHTAENRTAAIGAFLRSAHEALLPTPAYLAADIFGLTMWELGDSGI
CCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
GQNLEAVAGVVDYVCPMLYPSHFWSGSLGYELPNDHPYEVMRYSLENGLKRVPEARAKFR
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHH
PWLQDFSYGRGKPYGPDEVRAQIRAVYDAGLSSWMLWNADSVYQEAALETSG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA