Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633013

Identifier: 221633013

GI number: 221633013

Start: 993018

End: 993608

Strand: Reverse

Name: 221633013

Synonym: trd_1028

Alternate gene names: NA

Gene position: 993608-993018 (Counterclockwise)

Preceding gene: 221633014

Following gene: 221633011

Centisome position: 49.61

GC content: 58.04

Gene sequence:

>591_bases
GTGAGCGGTGAGACGCTACCGCGGGAGCAGCCGTCACTGCAAGACATGGATCTTCTGAGCCGACTAACGCAATTCTTTGA
AGCCCTTGATCAGCACCTTCGAGCAGGGCATGGATGGTTCATCTTCAACGCTCGTGGACAGCGCGGTGCGCGCATCACGG
CCTTTATCTTGGGACGGCTCGCCGATTACCAGCTTTTGTACACGTATTACTTCGTTCCCTGGCGGGACTTCGCGCTGAAC
GCATACATGGTCGAGGTCGAACTCCAGTCCTTGGCTGCGCAACGTCAAGTACTGCAAGGGCGTGTTCGCCAGGAGTACGA
CATCGCGACACGCGTCTCGCGCGACAATCTCGCCAAGATGATGGTTTCGGATCTTTTGATCGTCGCTGGGGTTCTCCCGC
AACATCGACACGAGTTGGTCTTCTTGGATCAAGCAGTCGAGCGACGTTACCAGCATCGCCTTTCGACGATCCTGATCACG
CCGGCACAGCCGCACGAGCTCGCGTTCGAGATCGAGCGTGTGGCTCCTGGCGAGCGCTATTGGGAGCGACTCTTCGAACG
GATGTACGAGCGAAGCCTGATCGCGCTCTGA

Upstream 100 bases:

>100_bases
TCGTTGGAAAAGGGGGGTGACGTGGCCATCATCTGATGCGCCATAATAGGCGTATCAGGAAGCGAACCGGGCGAGAGCCC
GGCGACTGGAGGCGAGAGCC

Downstream 100 bases:

>100_bases
GCTAGAGCCGGCGAGCGAGTGCGTGATCGGCGACCGCAGCGAGCATATCCCGGCCCTCGGTGGGTGGAAGACCGGCGAGC
AGAGCCTTGGCGTCTTCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSGETLPREQPSLQDMDLLSRLTQFFEALDQHLRAGHGWFIFNARGQRGARITAFILGRLADYQLLYTYYFVPWRDFALN
AYMVEVELQSLAAQRQVLQGRVRQEYDIATRVSRDNLAKMMVSDLLIVAGVLPQHRHELVFLDQAVERRYQHRLSTILIT
PAQPHELAFEIERVAPGERYWERLFERMYERSLIAL

Sequences:

>Translated_196_residues
MSGETLPREQPSLQDMDLLSRLTQFFEALDQHLRAGHGWFIFNARGQRGARITAFILGRLADYQLLYTYYFVPWRDFALN
AYMVEVELQSLAAQRQVLQGRVRQEYDIATRVSRDNLAKMMVSDLLIVAGVLPQHRHELVFLDQAVERRYQHRLSTILIT
PAQPHELAFEIERVAPGERYWERLFERMYERSLIAL
>Mature_195_residues
SGETLPREQPSLQDMDLLSRLTQFFEALDQHLRAGHGWFIFNARGQRGARITAFILGRLADYQLLYTYYFVPWRDFALNA
YMVEVELQSLAAQRQVLQGRVRQEYDIATRVSRDNLAKMMVSDLLIVAGVLPQHRHELVFLDQAVERRYQHRLSTILITP
AQPHELAFEIERVAPGERYWERLFERMYERSLIAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23069; Mature: 22938

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGETLPREQPSLQDMDLLSRLTQFFEALDQHLRAGHGWFIFNARGQRGARITAFILGRL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH
ADYQLLYTYYFVPWRDFALNAYMVEVELQSLAAQRQVLQGRVRQEYDIATRVSRDNLAKM
HHHHHHHHHHCCCHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
MVSDLLIVAGVLPQHRHELVFLDQAVERRYQHRLSTILITPAQPHELAFEIERVAPGERY
HHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCHHH
WERLFERMYERSLIAL
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGETLPREQPSLQDMDLLSRLTQFFEALDQHLRAGHGWFIFNARGQRGARITAFILGRL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH
ADYQLLYTYYFVPWRDFALNAYMVEVELQSLAAQRQVLQGRVRQEYDIATRVSRDNLAKM
HHHHHHHHHHCCCHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
MVSDLLIVAGVLPQHRHELVFLDQAVERRYQHRLSTILITPAQPHELAFEIERVAPGERY
HHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCHHH
WERLFERMYERSLIAL
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA