| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is argK [C]
Identifier: 221632809
GI number: 221632809
Start: 785244
End: 786200
Strand: Reverse
Name: argK [C]
Synonym: trd_0803
Alternate gene names: 221632809
Gene position: 786200-785244 (Counterclockwise)
Preceding gene: 221632810
Following gene: 221632805
Centisome position: 39.25
GC content: 62.07
Gene sequence:
>957_bases ATGTCGCAGGACTTGGGAAACTTGCTCGAAGGTGTTCGGAATCGGGATCGTTCCTCCCTTGCGCGCGCACTCTCCCTCTT GGAGCGTTATCCTGACGTGGCTCATCTGCTTCCGCGCGAGCGCGGAGGACACGCAACGGTCGTCGCGGTGGCTGGGCCGC CGGGAGCTGGCAAGAGTACTTTGCTGGGTCGGGTAGCTGCTGAAATCACAATGAGGGATATGTCGGTTGCTGTCCTCGCC TTCGATCCGGTCAGCCCGCGTTCCGGAGGCGCCCTCCTCGGTGATCGGATCCGCATGCTCGACGCCGCGGAGCACCCCAA CGTCTATGTGCGTTCCATCGCTGCGCGCGACCCGGCCGGTTCTCCCGTTCTCCCTGCGCTCCTCGCTGTCCTCGATCTTT ATGGATTCGACTTCGTCTTTCTCGAAGCGGTCGGTGCCGGGCAGGAGGCTTCGCCGCTCCTCCTCGCCGCAGATCTCGCT CTCCTCGTACTCGTCCCCGGGCTCGGCGATAGTGTGCAAACGTTGAAGGCGGGCGTTCTCGAGATTGCAGATCTTATCGT GATCAACAAATCGGATCGTCCTGGTGCAGCTGAACTCGTTCGCGACCTTTCAGCTTACTACCGGCTCCTCGCCGATACGA GTCACCCTGTTCCACCCATCCTGCAGACGGTCGGGAGCGAAGGACAGGGAATCACAGCGGTGCTCGAGGCGATCACTGAA CTCCGAGATCGCTATGCCGCGAGTGGCATCCTCGAAGAACGGCGGCGCCGTGCTGCCACTCGTCTGTGGCAGCACACTCT CCGCACGCGCTGTCTTCGCATCATCGACGAATTGCTGAACGACGGACCCGCGCCGGACGACGGCGATCATGAAATGGGCA CTCGTGAGCGACAGCTTTACCGGAAACTTGCCGAGCGGTTCGCCCTACTTGCCGCCTCGTCGGACGATTCTCGCTGA
Upstream 100 bases:
>100_bases GGGAGTTGCCGAAGTTTTCGGCCCCGGTACGCCGCTATCAGAAATCATTCGCTTCATCGAAACGCATGTTGGTGAGCCAG TGAGGGGCGCGTGAGTCGAG
Downstream 100 bases:
>100_bases CGGCGTTGACCAGCACAGCGATTCGCGATCTTAGCAGCAGCTGCTCCGGCCCCAACACCATTGTCGATATTGACGACGAC CAGGCCGGGAGCGCAGGACT
Product: ArgK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSQDLGNLLEGVRNRDRSSLARALSLLERYPDVAHLLPRERGGHATVVAVAGPPGAGKSTLLGRVAAEITMRDMSVAVLA FDPVSPRSGGALLGDRIRMLDAAEHPNVYVRSIAARDPAGSPVLPALLAVLDLYGFDFVFLEAVGAGQEASPLLLAADLA LLVLVPGLGDSVQTLKAGVLEIADLIVINKSDRPGAAELVRDLSAYYRLLADTSHPVPPILQTVGSEGQGITAVLEAITE LRDRYAASGILEERRRRAATRLWQHTLRTRCLRIIDELLNDGPAPDDGDHEMGTRERQLYRKLAERFALLAASSDDSR
Sequences:
>Translated_318_residues MSQDLGNLLEGVRNRDRSSLARALSLLERYPDVAHLLPRERGGHATVVAVAGPPGAGKSTLLGRVAAEITMRDMSVAVLA FDPVSPRSGGALLGDRIRMLDAAEHPNVYVRSIAARDPAGSPVLPALLAVLDLYGFDFVFLEAVGAGQEASPLLLAADLA LLVLVPGLGDSVQTLKAGVLEIADLIVINKSDRPGAAELVRDLSAYYRLLADTSHPVPPILQTVGSEGQGITAVLEAITE LRDRYAASGILEERRRRAATRLWQHTLRTRCLRIIDELLNDGPAPDDGDHEMGTRERQLYRKLAERFALLAASSDDSR >Mature_317_residues SQDLGNLLEGVRNRDRSSLARALSLLERYPDVAHLLPRERGGHATVVAVAGPPGAGKSTLLGRVAAEITMRDMSVAVLAF DPVSPRSGGALLGDRIRMLDAAEHPNVYVRSIAARDPAGSPVLPALLAVLDLYGFDFVFLEAVGAGQEASPLLLAADLAL LVLVPGLGDSVQTLKAGVLEIADLIVINKSDRPGAAELVRDLSAYYRLLADTSHPVPPILQTVGSEGQGITAVLEAITEL RDRYAASGILEERRRRAATRLWQHTLRTRCLRIIDELLNDGPAPDDGDHEMGTRERQLYRKLAERFALLAASSDDSR
Specific function: May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone [H]
COG id: COG1703
COG function: function code E; Putative periplasmic protein kinase ArgK and related GTPases of G3E family
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgK family [H]
Homologues:
Organism=Homo sapiens, GI26892295, Length=288, Percent_Identity=31.25, Blast_Score=120, Evalue=1e-27, Organism=Escherichia coli, GI1789285, Length=291, Percent_Identity=31.6151202749141, Blast_Score=120, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71994271, Length=290, Percent_Identity=28.6206896551724, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71994275, Length=229, Percent_Identity=31.0043668122271, Blast_Score=110, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005129 - InterPro: IPR003593 [H]
Pfam domain/function: PF03308 ArgK [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 34183; Mature: 34051
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDLGNLLEGVRNRDRSSLARALSLLERYPDVAHLLPRERGGHATVVAVAGPPGAGKST CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEECCCCCCHHH LLGRVAAEITMRDMSVAVLAFDPVSPRSGGALLGDRIRMLDAAEHPNVYVRSIAARDPAG HHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCC SPVLPALLAVLDLYGFDFVFLEAVGAGQEASPLLLAADLALLVLVPGLGDSVQTLKAGVL CCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH EIADLIVINKSDRPGAAELVRDLSAYYRLLADTSHPVPPILQTVGSEGQGITAVLEAITE HHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHH LRDRYAASGILEERRRRAATRLWQHTLRTRCLRIIDELLNDGPAPDDGDHEMGTRERQLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH RKLAERFALLAASSDDSR HHHHHHHHHHHCCCCCCC >Mature Secondary Structure SQDLGNLLEGVRNRDRSSLARALSLLERYPDVAHLLPRERGGHATVVAVAGPPGAGKST CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEECCCCCCHHH LLGRVAAEITMRDMSVAVLAFDPVSPRSGGALLGDRIRMLDAAEHPNVYVRSIAARDPAG HHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCC SPVLPALLAVLDLYGFDFVFLEAVGAGQEASPLLLAADLALLVLVPGLGDSVQTLKAGVL CCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH EIADLIVINKSDRPGAAELVRDLSAYYRLLADTSHPVPPILQTVGSEGQGITAVLEAITE HHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHH LRDRYAASGILEERRRRAATRLWQHTLRTRCLRIIDELLNDGPAPDDGDHEMGTRERQLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH RKLAERFALLAASSDDSR HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Arg [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]