| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is mfpsA [H]
Identifier: 221632675
GI number: 221632675
Start: 653128
End: 654234
Strand: Reverse
Name: mfpsA [H]
Synonym: trd_0658
Alternate gene names: 221632675
Gene position: 654234-653128 (Counterclockwise)
Preceding gene: 221632676
Following gene: 221632674
Centisome position: 32.66
GC content: 62.33
Gene sequence:
>1107_bases ATGAGTACTCTGCTGATCGGTATCGACGCCAGCCGCGCTTGTCGCGAACAGATGACAGGAACCGAGCGATACGCTCGACG TGTGATCGACGGCTTGCTCACGTTACCGAGCCCGGTCCGCTTTCGTCTTTATCTTGATCGGGTCGGTCCGATTCCCGCCG ACTGGACACGGGTTGAGATTCGCCCGATACCGTTCCCTAGGCTCTGGACGCATCTTCGCCTCGCCTACGAACTGCGGCAC AACCCGGTCTCGCTCCTCTTCGTACCAGCGCATGTCCTGCCCTTCCGCTGCCCCGTGCCTGCCGTTGTCACCGTCCACGA TCTCGGCTATCGTTACGAGCCGGACGCTCATCCACTGGCGCAACGCCTGTACCTTGAACTCGGAACGCGCCGAAGTGTTC GCCAGGCCCGGCTCGTCATCGCGATTTCACAGGCCACAGCTCGCGACCTCACACGTTTCTACCGAGTTCCCGACGATCGC ATCAGGATTGTCTCGCATGGTGTCGACGAACGGTTCTTCCCACGTCCTGAATCTGAGCGAGCTGCTGTCCGGCAACGCTA CGGTCTCGCACGGCCGTTTCTCCTCTTCGTTGGTACACTGCAACCGCGCAAGAACATCGTGCGGCTCGTGCAGGCATTCG AACTCCTGGCTCGCTCCGAGGAAGAGCTGGATCTCGTCCTCGCCGGCAAGCGAGGCTGGCTCGCTAGCCCCATCGAACAG GCACTGTCATCGAGCCCTGTGCGTCACCGCATCCACTGGCTCGGACACGTCGCGGAGGAAGACCTTCCCGCGCTCTATAG CGCGGCTGAGGTCTTCGTGTACCCATCGTTGTACGAAGGGTTCGGTCTGCCAGTCCTCGAAGCGATGGCGAGTGGCGTAC CAGTCGTGACGACGCGTCGCGGCGCACTGGAAGAGATCGCTGGCCCAGCTCTCTTCTGTAACCCTTTGGATCCGCGGGAT ATCGCAGAAGCCATCCGCACGGCCCGCGAGCCGCAACGTCGCGCGCGACTCGTCGCCGCGGGGCAGGAACATGCCCGGCG CTTTACTTGGCATCGCACAGCCAACGAAACGCTCGCAGTTCTGCTCGAAGCGGTGGGCACTCCATGA
Upstream 100 bases:
>100_bases TCGGACCGGATCGCGCATGCGGTACTGCCTGTATGATGGCGATCGACGTCGACGATGTGCTGGGAGCAGCCCTGGAGCTC CTCGAGAGTCGTTCTATCCG
Downstream 100 bases:
>100_bases GAATCGGACGCTTCGAACGGATGCTCCTCATCAAGATCGCTGATCTCGGTGATGCCGCCATTACCTTGCCGGCCATCCAC TCGCTGCGAAAGGCGTATCC
Product: AprM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSTLLIGIDASRACREQMTGTERYARRVIDGLLTLPSPVRFRLYLDRVGPIPADWTRVEIRPIPFPRLWTHLRLAYELRH NPVSLLFVPAHVLPFRCPVPAVVTVHDLGYRYEPDAHPLAQRLYLELGTRRSVRQARLVIAISQATARDLTRFYRVPDDR IRIVSHGVDERFFPRPESERAAVRQRYGLARPFLLFVGTLQPRKNIVRLVQAFELLARSEEELDLVLAGKRGWLASPIEQ ALSSSPVRHRIHWLGHVAEEDLPALYSAAEVFVYPSLYEGFGLPVLEAMASGVPVVTTRRGALEEIAGPALFCNPLDPRD IAEAIRTAREPQRRARLVAAGQEHARRFTWHRTANETLAVLLEAVGTP
Sequences:
>Translated_368_residues MSTLLIGIDASRACREQMTGTERYARRVIDGLLTLPSPVRFRLYLDRVGPIPADWTRVEIRPIPFPRLWTHLRLAYELRH NPVSLLFVPAHVLPFRCPVPAVVTVHDLGYRYEPDAHPLAQRLYLELGTRRSVRQARLVIAISQATARDLTRFYRVPDDR IRIVSHGVDERFFPRPESERAAVRQRYGLARPFLLFVGTLQPRKNIVRLVQAFELLARSEEELDLVLAGKRGWLASPIEQ ALSSSPVRHRIHWLGHVAEEDLPALYSAAEVFVYPSLYEGFGLPVLEAMASGVPVVTTRRGALEEIAGPALFCNPLDPRD IAEAIRTAREPQRRARLVAAGQEHARRFTWHRTANETLAVLLEAVGTP >Mature_367_residues STLLIGIDASRACREQMTGTERYARRVIDGLLTLPSPVRFRLYLDRVGPIPADWTRVEIRPIPFPRLWTHLRLAYELRHN PVSLLFVPAHVLPFRCPVPAVVTVHDLGYRYEPDAHPLAQRLYLELGTRRSVRQARLVIAISQATARDLTRFYRVPDDRI RIVSHGVDERFFPRPESERAAVRQRYGLARPFLLFVGTLQPRKNIVRLVQAFELLARSEEELDLVLAGKRGWLASPIEQA LSSSPVRHRIHWLGHVAEEDLPALYSAAEVFVYPSLYEGFGLPVLEAMASGVPVVTTRRGALEEIAGPALFCNPLDPRDI AEAIRTAREPQRRARLVAAGQEHARRFTWHRTANETLAVLLEAVGTP
Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR000368 [H]
Pfam domain/function: PF00534 Glycos_transf_1; PF00862 Sucrose_synth [H]
EC number: =2.4.1.246 [H]
Molecular weight: Translated: 41718; Mature: 41587
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLIGIDASRACREQMTGTERYARRVIDGLLTLPSPVRFRLYLDRVGPIPADWTRVEI CCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEE RPIPFPRLWTHLRLAYELRHNPVSLLFVPAHVLPFRCPVPAVVTVHDLGYRYEPDAHPLA ECCCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCEEEEECCCCCCCCCCCHHH QRLYLELGTRRSVRQARLVIAISQATARDLTRFYRVPDDRIRIVSHGVDERFFPRPESER HHHHHHHCCCHHHHHEEEEEEECHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCHHH AAVRQRYGLARPFLLFVGTLQPRKNIVRLVQAFELLARSEEELDLVLAGKRGWLASPIEQ HHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH ALSSSPVRHRIHWLGHVAEEDLPALYSAAEVFVYPSLYEGFGLPVLEAMASGVPVVTTRR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCCHHHHHHHCCCCEEEECC GALEEIAGPALFCNPLDPRDIAEAIRTAREPQRRARLVAAGQEHARRFTWHRTANETLAV CHHHHHCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH LLEAVGTP HHHHHCCC >Mature Secondary Structure STLLIGIDASRACREQMTGTERYARRVIDGLLTLPSPVRFRLYLDRVGPIPADWTRVEI CEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEE RPIPFPRLWTHLRLAYELRHNPVSLLFVPAHVLPFRCPVPAVVTVHDLGYRYEPDAHPLA ECCCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCEEEEECCCCCCCCCCCHHH QRLYLELGTRRSVRQARLVIAISQATARDLTRFYRVPDDRIRIVSHGVDERFFPRPESER HHHHHHHCCCHHHHHEEEEEEECHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCHHH AAVRQRYGLARPFLLFVGTLQPRKNIVRLVQAFELLARSEEELDLVLAGKRGWLASPIEQ HHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH ALSSSPVRHRIHWLGHVAEEDLPALYSAAEVFVYPSLYEGFGLPVLEAMASGVPVVTTRR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCCHHHHHHHCCCCEEEECC GALEEIAGPALFCNPLDPRDIAEAIRTAREPQRRARLVAAGQEHARRFTWHRTANETLAV CHHHHHCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH LLEAVGTP HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]