Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is mfpsA [H]

Identifier: 221632675

GI number: 221632675

Start: 653128

End: 654234

Strand: Reverse

Name: mfpsA [H]

Synonym: trd_0658

Alternate gene names: 221632675

Gene position: 654234-653128 (Counterclockwise)

Preceding gene: 221632676

Following gene: 221632674

Centisome position: 32.66

GC content: 62.33

Gene sequence:

>1107_bases
ATGAGTACTCTGCTGATCGGTATCGACGCCAGCCGCGCTTGTCGCGAACAGATGACAGGAACCGAGCGATACGCTCGACG
TGTGATCGACGGCTTGCTCACGTTACCGAGCCCGGTCCGCTTTCGTCTTTATCTTGATCGGGTCGGTCCGATTCCCGCCG
ACTGGACACGGGTTGAGATTCGCCCGATACCGTTCCCTAGGCTCTGGACGCATCTTCGCCTCGCCTACGAACTGCGGCAC
AACCCGGTCTCGCTCCTCTTCGTACCAGCGCATGTCCTGCCCTTCCGCTGCCCCGTGCCTGCCGTTGTCACCGTCCACGA
TCTCGGCTATCGTTACGAGCCGGACGCTCATCCACTGGCGCAACGCCTGTACCTTGAACTCGGAACGCGCCGAAGTGTTC
GCCAGGCCCGGCTCGTCATCGCGATTTCACAGGCCACAGCTCGCGACCTCACACGTTTCTACCGAGTTCCCGACGATCGC
ATCAGGATTGTCTCGCATGGTGTCGACGAACGGTTCTTCCCACGTCCTGAATCTGAGCGAGCTGCTGTCCGGCAACGCTA
CGGTCTCGCACGGCCGTTTCTCCTCTTCGTTGGTACACTGCAACCGCGCAAGAACATCGTGCGGCTCGTGCAGGCATTCG
AACTCCTGGCTCGCTCCGAGGAAGAGCTGGATCTCGTCCTCGCCGGCAAGCGAGGCTGGCTCGCTAGCCCCATCGAACAG
GCACTGTCATCGAGCCCTGTGCGTCACCGCATCCACTGGCTCGGACACGTCGCGGAGGAAGACCTTCCCGCGCTCTATAG
CGCGGCTGAGGTCTTCGTGTACCCATCGTTGTACGAAGGGTTCGGTCTGCCAGTCCTCGAAGCGATGGCGAGTGGCGTAC
CAGTCGTGACGACGCGTCGCGGCGCACTGGAAGAGATCGCTGGCCCAGCTCTCTTCTGTAACCCTTTGGATCCGCGGGAT
ATCGCAGAAGCCATCCGCACGGCCCGCGAGCCGCAACGTCGCGCGCGACTCGTCGCCGCGGGGCAGGAACATGCCCGGCG
CTTTACTTGGCATCGCACAGCCAACGAAACGCTCGCAGTTCTGCTCGAAGCGGTGGGCACTCCATGA

Upstream 100 bases:

>100_bases
TCGGACCGGATCGCGCATGCGGTACTGCCTGTATGATGGCGATCGACGTCGACGATGTGCTGGGAGCAGCCCTGGAGCTC
CTCGAGAGTCGTTCTATCCG

Downstream 100 bases:

>100_bases
GAATCGGACGCTTCGAACGGATGCTCCTCATCAAGATCGCTGATCTCGGTGATGCCGCCATTACCTTGCCGGCCATCCAC
TCGCTGCGAAAGGCGTATCC

Product: AprM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSTLLIGIDASRACREQMTGTERYARRVIDGLLTLPSPVRFRLYLDRVGPIPADWTRVEIRPIPFPRLWTHLRLAYELRH
NPVSLLFVPAHVLPFRCPVPAVVTVHDLGYRYEPDAHPLAQRLYLELGTRRSVRQARLVIAISQATARDLTRFYRVPDDR
IRIVSHGVDERFFPRPESERAAVRQRYGLARPFLLFVGTLQPRKNIVRLVQAFELLARSEEELDLVLAGKRGWLASPIEQ
ALSSSPVRHRIHWLGHVAEEDLPALYSAAEVFVYPSLYEGFGLPVLEAMASGVPVVTTRRGALEEIAGPALFCNPLDPRD
IAEAIRTAREPQRRARLVAAGQEHARRFTWHRTANETLAVLLEAVGTP

Sequences:

>Translated_368_residues
MSTLLIGIDASRACREQMTGTERYARRVIDGLLTLPSPVRFRLYLDRVGPIPADWTRVEIRPIPFPRLWTHLRLAYELRH
NPVSLLFVPAHVLPFRCPVPAVVTVHDLGYRYEPDAHPLAQRLYLELGTRRSVRQARLVIAISQATARDLTRFYRVPDDR
IRIVSHGVDERFFPRPESERAAVRQRYGLARPFLLFVGTLQPRKNIVRLVQAFELLARSEEELDLVLAGKRGWLASPIEQ
ALSSSPVRHRIHWLGHVAEEDLPALYSAAEVFVYPSLYEGFGLPVLEAMASGVPVVTTRRGALEEIAGPALFCNPLDPRD
IAEAIRTAREPQRRARLVAAGQEHARRFTWHRTANETLAVLLEAVGTP
>Mature_367_residues
STLLIGIDASRACREQMTGTERYARRVIDGLLTLPSPVRFRLYLDRVGPIPADWTRVEIRPIPFPRLWTHLRLAYELRHN
PVSLLFVPAHVLPFRCPVPAVVTVHDLGYRYEPDAHPLAQRLYLELGTRRSVRQARLVIAISQATARDLTRFYRVPDDRI
RIVSHGVDERFFPRPESERAAVRQRYGLARPFLLFVGTLQPRKNIVRLVQAFELLARSEEELDLVLAGKRGWLASPIEQA
LSSSPVRHRIHWLGHVAEEDLPALYSAAEVFVYPSLYEGFGLPVLEAMASGVPVVTTRRGALEEIAGPALFCNPLDPRDI
AEAIRTAREPQRRARLVAAGQEHARRFTWHRTANETLAVLLEAVGTP

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR000368 [H]

Pfam domain/function: PF00534 Glycos_transf_1; PF00862 Sucrose_synth [H]

EC number: =2.4.1.246 [H]

Molecular weight: Translated: 41718; Mature: 41587

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLLIGIDASRACREQMTGTERYARRVIDGLLTLPSPVRFRLYLDRVGPIPADWTRVEI
CCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEE
RPIPFPRLWTHLRLAYELRHNPVSLLFVPAHVLPFRCPVPAVVTVHDLGYRYEPDAHPLA
ECCCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCEEEEECCCCCCCCCCCHHH
QRLYLELGTRRSVRQARLVIAISQATARDLTRFYRVPDDRIRIVSHGVDERFFPRPESER
HHHHHHHCCCHHHHHEEEEEEECHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCHHH
AAVRQRYGLARPFLLFVGTLQPRKNIVRLVQAFELLARSEEELDLVLAGKRGWLASPIEQ
HHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH
ALSSSPVRHRIHWLGHVAEEDLPALYSAAEVFVYPSLYEGFGLPVLEAMASGVPVVTTRR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCCHHHHHHHCCCCEEEECC
GALEEIAGPALFCNPLDPRDIAEAIRTAREPQRRARLVAAGQEHARRFTWHRTANETLAV
CHHHHHCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
LLEAVGTP
HHHHHCCC
>Mature Secondary Structure 
STLLIGIDASRACREQMTGTERYARRVIDGLLTLPSPVRFRLYLDRVGPIPADWTRVEI
CEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEE
RPIPFPRLWTHLRLAYELRHNPVSLLFVPAHVLPFRCPVPAVVTVHDLGYRYEPDAHPLA
ECCCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCEEEEECCCCCCCCCCCHHH
QRLYLELGTRRSVRQARLVIAISQATARDLTRFYRVPDDRIRIVSHGVDERFFPRPESER
HHHHHHHCCCHHHHHEEEEEEECHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCHHH
AAVRQRYGLARPFLLFVGTLQPRKNIVRLVQAFELLARSEEELDLVLAGKRGWLASPIEQ
HHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHH
ALSSSPVRHRIHWLGHVAEEDLPALYSAAEVFVYPSLYEGFGLPVLEAMASGVPVVTTRR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCCCHHHHHHHCCCCEEEECC
GALEEIAGPALFCNPLDPRDIAEAIRTAREPQRRARLVAAGQEHARRFTWHRTANETLAV
CHHHHHCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
LLEAVGTP
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]