| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632354
Identifier: 221632354
GI number: 221632354
Start: 329372
End: 329521
Strand: Reverse
Name: 221632354
Synonym: trd_0325
Alternate gene names: NA
Gene position: 329521-329372 (Counterclockwise)
Preceding gene: 221632355
Following gene: 221632353
Centisome position: 16.45
GC content: 52.67
Gene sequence:
>150_bases ATGCTCCGATCCGACCTCGCTCGAAAGCTGTTCGGAGAGACCGGGTTCTTCATTCCTGCAACGTGTCAGGAATGGATCCA GCAAATCGCACCCTTCAGCGTTCGGAATGCCGGAACTTTCCGGTTGATGATATTGCATGACAACCTGTAG
Upstream 100 bases:
>100_bases CCTTCCGCAACACCGATCTCCCTCACCTGCAGGAGCGATTGCAACCCAATCTCTCCTGAACTCGCTTTCCGACTGACTCT ATCCGTCGCTCGATGCCGTC
Downstream 100 bases:
>100_bases ACTTGACATCGGGACCCGCCAGACGAACGGATCGAAACCGAGGCTCGCAGGCCACGGAGGTGGACTATGGCGCAAGCAGT CGCCACCCGACCGTTTACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MLRSDLARKLFGETGFFIPATCQEWIQQIAPFSVRNAGTFRLMILHDNL
Sequences:
>Translated_49_residues MLRSDLARKLFGETGFFIPATCQEWIQQIAPFSVRNAGTFRLMILHDNL >Mature_49_residues MLRSDLARKLFGETGFFIPATCQEWIQQIAPFSVRNAGTFRLMILHDNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5655; Mature: 5655
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSDLARKLFGETGFFIPATCQEWIQQIAPFSVRNAGTFRLMILHDNL CCHHHHHHHHHCCCCCEECHHHHHHHHHHCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MLRSDLARKLFGETGFFIPATCQEWIQQIAPFSVRNAGTFRLMILHDNL CCHHHHHHHHHCCCCCEECHHHHHHHHHHCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA