| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632340
Identifier: 221632340
GI number: 221632340
Start: 316419
End: 316862
Strand: Reverse
Name: 221632340
Synonym: trd_0310
Alternate gene names: NA
Gene position: 316862-316419 (Counterclockwise)
Preceding gene: 221632341
Following gene: 221632338
Centisome position: 15.82
GC content: 66.44
Gene sequence:
>444_bases TTGCGAGCAGTGGCCCGTCAGCAGGACAGTCCGCTGCGGTGCATGGTCGAGACGACCGGTGGAACGATCGTCAGCGAAGC TCACCCCGGCGTCGGCGGGCCAGGCACCGCCAGTTGCTCCGGTGACCTGCTCCTGGCCGCCTTAGCCGCGTGCGCGCAGA TCACTTGCCAGATGGTCGCGACCGCGCTCGGCATCCCGCTCACGCGAGTGAGCGCGACAGCCGAGGGTGACCTGGACCTC CGCGGGACGCTCGGCGTGTCACGTGAGGTCCCGGTCGGGTTCGGAGCGATCCGCCTCTTCATCGATATCGAGGCACCGGA CGCGACACCCGAGCAACTGGCGAGCCTTCGCGAGAAAACGGAGCAATTCTGTGTCATCTTCCATACGCTCCGTCAGCCGC CAGAACTCAGCGTGCAGTGGTCCTCCAGTAACGCTCAGCCGTAG
Upstream 100 bases:
>100_bases GCCAGTGCAGCGAAAGGAAGAGAACATGCTGGATCTGCGCGCTCTGCAACGACCGCTCAAGCAGCGCTAACGCGAACGGC CCGAGGAGGCGCTCATCACC
Downstream 100 bases:
>100_bases AGCTCAGCCAGCCGATCGATCGTGAAACCGGGGGCCTGACATGCCTCGATGATGCGCCGTTCGCGGGCTTCCACTTCTTT GGCTGCTCGGTAGAGTTCCG
Product: OsmC-like protein
Products: NA
Alternate protein names: OsmC-Like Protein; Osmc Family Protein
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRAVARQQDSPLRCMVETTGGTIVSEAHPGVGGPGTASCSGDLLLAALAACAQITCQMVATALGIPLTRVSATAEGDLDL RGTLGVSREVPVGFGAIRLFIDIEAPDATPEQLASLREKTEQFCVIFHTLRQPPELSVQWSSSNAQP
Sequences:
>Translated_147_residues MRAVARQQDSPLRCMVETTGGTIVSEAHPGVGGPGTASCSGDLLLAALAACAQITCQMVATALGIPLTRVSATAEGDLDL RGTLGVSREVPVGFGAIRLFIDIEAPDATPEQLASLREKTEQFCVIFHTLRQPPELSVQWSSSNAQP >Mature_147_residues MRAVARQQDSPLRCMVETTGGTIVSEAHPGVGGPGTASCSGDLLLAALAACAQITCQMVATALGIPLTRVSATAEGDLDL RGTLGVSREVPVGFGAIRLFIDIEAPDATPEQLASLREKTEQFCVIFHTLRQPPELSVQWSSSNAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15374; Mature: 15374
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVARQQDSPLRCMVETTGGTIVSEAHPGVGGPGTASCSGDLLLAALAACAQITCQMVA CCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TALGIPLTRVSATAEGDLDLRGTLGVSREVPVGFGAIRLFIDIEAPDATPEQLASLREKT HHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHH EQFCVIFHTLRQPPELSVQWSSSNAQP HHHHHHHHHHCCCCCCEEEECCCCCCC >Mature Secondary Structure MRAVARQQDSPLRCMVETTGGTIVSEAHPGVGGPGTASCSGDLLLAALAACAQITCQMVA CCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TALGIPLTRVSATAEGDLDLRGTLGVSREVPVGFGAIRLFIDIEAPDATPEQLASLREKT HHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHH EQFCVIFHTLRQPPELSVQWSSSNAQP HHHHHHHHHHCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA