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The map label for this gene is ycjP [H]

Identifier: 221632282

GI number: 221632282

Start: 255181

End: 256206

Strand: Reverse

Name: ycjP [H]

Synonym: trd_0249

Alternate gene names: 221632282

Gene position: 256206-255181 (Counterclockwise)

Preceding gene: 221632283

Following gene: 221632281

Centisome position: 12.79

GC content: 61.5

Gene sequence:

>1026_bases
ATGGCACTCCGCTGGCAGACTAGCCCGACTCGCCCTGGACCCCTCGCCGCCCTCGTGTCCTACGCCATTCTGTCTCTCTG
GGCAGCGGTCGTTCTCTTTCCGCTCTACTGGTTGGCCATCACCGCCTTCAAGCTTCCAGTTCATGTCAACGAAGGACCAA
CCTATCTGCCGTTCGTTGACTTCCAGCCTTCGCTGCATGCCTGGCACTACATCCTGGTCGATCTCGGCAACGATACGCTT
CGCCCGTATCTCAATACGGTTATCGTCGGAGGAACCAGTTCCATCCTTACCTTGCTCCTCGGTGCCGCAGCGACTTACGG
GCTGAGTCGCTTCACCTATCGCGTCCGACTGGCCAGCGTCGTCGTCTTTCTCGCTGGCGCGATTCTCGCTGGCATCGGTA
TCCAACTGGGACTGCCGTGGCCATTGGCGGTGGCCGGTGCGTTGGGAGCGTTCGTCCTCGCCCGTGCAACCGCCTTGCGG
CGTGCAGCTGGTCCGCAGCTCGGCAATGCCGACATCGCCTTCTGGATGATTTCGCAGCGGATGCTTCCACCGGTTGCCAT
CGTGATCCCGATTTACATTCTCTTCCAGCGGCTCGGCATGTTGGATACGCGGACGGCACTCGTCGTGTCCTATGTCGCGG
CGAACCTCCCGATCGCCGTCTGGCTACTGCGTGACTACTTCCACACGATCCCGATCGAACTGGAAGAGAGTGCCGCGATC
GACGGGGCTAACCGCTACCAAATTCTCTGGCGGATCGTTCTGCCGCTCGCTCTACCCGGTCTCGTCGCGACATTTCTGTT
CATCTTCGTCCTGGCCTGGAACGAGTACCTGCTCGCCCTCTTCCTGAGCAGCGCCAAGGCGCAAACGATGCCCTTGCTCG
TGGCAGCGCAGAACGCGACGCGCGGTCCACAGTGGTGGTACATGTCGGTCCTCATCCTGCTCATGATCGCACCCGTCATC
GCGCTCGCACTCGTCCTCGAGCGGTACATCGCGCGCGGTCTTCTGCTCGGTGCCGTGCGCGGATGA

Upstream 100 bases:

>100_bases
GCTGTCGCCTATACGCTCCTCTTCGTCGTCACCTTTGTCGGCATCGCGTACGTGCGGCTGCTTCACCGCCGAGTGAGCGA
AGCGCTTTAGGGGGATCGTC

Downstream 100 bases:

>100_bases
ACAGGAGGAAGGCAGGCCGATGCAACTCCACGACCGTATCGCCCTCGTGACCGGTGCTGGTTCCGGGATCGGTCGTGCAA
TAGCCGAGCGGTTCGCCTCC

Product: inner membrane ABC transporter permease YcjP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MALRWQTSPTRPGPLAALVSYAILSLWAAVVLFPLYWLAITAFKLPVHVNEGPTYLPFVDFQPSLHAWHYILVDLGNDTL
RPYLNTVIVGGTSSILTLLLGAAATYGLSRFTYRVRLASVVVFLAGAILAGIGIQLGLPWPLAVAGALGAFVLARATALR
RAAGPQLGNADIAFWMISQRMLPPVAIVIPIYILFQRLGMLDTRTALVVSYVAANLPIAVWLLRDYFHTIPIELEESAAI
DGANRYQILWRIVLPLALPGLVATFLFIFVLAWNEYLLALFLSSAKAQTMPLLVAAQNATRGPQWWYMSVLILLMIAPVI
ALALVLERYIARGLLLGAVRG

Sequences:

>Translated_341_residues
MALRWQTSPTRPGPLAALVSYAILSLWAAVVLFPLYWLAITAFKLPVHVNEGPTYLPFVDFQPSLHAWHYILVDLGNDTL
RPYLNTVIVGGTSSILTLLLGAAATYGLSRFTYRVRLASVVVFLAGAILAGIGIQLGLPWPLAVAGALGAFVLARATALR
RAAGPQLGNADIAFWMISQRMLPPVAIVIPIYILFQRLGMLDTRTALVVSYVAANLPIAVWLLRDYFHTIPIELEESAAI
DGANRYQILWRIVLPLALPGLVATFLFIFVLAWNEYLLALFLSSAKAQTMPLLVAAQNATRGPQWWYMSVLILLMIAPVI
ALALVLERYIARGLLLGAVRG
>Mature_340_residues
ALRWQTSPTRPGPLAALVSYAILSLWAAVVLFPLYWLAITAFKLPVHVNEGPTYLPFVDFQPSLHAWHYILVDLGNDTLR
PYLNTVIVGGTSSILTLLLGAAATYGLSRFTYRVRLASVVVFLAGAILAGIGIQLGLPWPLAVAGALGAFVLARATALRR
AAGPQLGNADIAFWMISQRMLPPVAIVIPIYILFQRLGMLDTRTALVVSYVAANLPIAVWLLRDYFHTIPIELEESAAID
GANRYQILWRIVLPLALPGLVATFLFIFVLAWNEYLLALFLSSAKAQTMPLLVAAQNATRGPQWWYMSVLILLMIAPVIA
LALVLERYIARGLLLGAVRG

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=197, Percent_Identity=39.5939086294416, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1789860, Length=172, Percent_Identity=31.3953488372093, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790464, Length=181, Percent_Identity=28.7292817679558, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37296; Mature: 37165

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRWQTSPTRPGPLAALVSYAILSLWAAVVLFPLYWLAITAFKLPVHVNEGPTYLPFVD
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEC
FQPSLHAWHYILVDLGNDTLRPYLNTVIVGGTSSILTLLLGAAATYGLSRFTYRVRLASV
CCCCHHHEEEEEEECCCCHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFLAGAILAGIGIQLGLPWPLAVAGALGAFVLARATALRRAAGPQLGNADIAFWMISQR
HHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MLPPVAIVIPIYILFQRLGMLDTRTALVVSYVAANLPIAVWLLRDYFHTIPIELEESAAI
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEECCCCCC
DGANRYQILWRIVLPLALPGLVATFLFIFVLAWNEYLLALFLSSAKAQTMPLLVAAQNAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
RGPQWWYMSVLILLMIAPVIALALVLERYIARGLLLGAVRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALRWQTSPTRPGPLAALVSYAILSLWAAVVLFPLYWLAITAFKLPVHVNEGPTYLPFVD
CEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEC
FQPSLHAWHYILVDLGNDTLRPYLNTVIVGGTSSILTLLLGAAATYGLSRFTYRVRLASV
CCCCHHHEEEEEEECCCCHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFLAGAILAGIGIQLGLPWPLAVAGALGAFVLARATALRRAAGPQLGNADIAFWMISQR
HHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MLPPVAIVIPIYILFQRLGMLDTRTALVVSYVAANLPIAVWLLRDYFHTIPIELEESAAI
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEECCCCCC
DGANRYQILWRIVLPLALPGLVATFLFIFVLAWNEYLLALFLSSAKAQTMPLLVAAQNAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
RGPQWWYMSVLILLMIAPVIALALVLERYIARGLLLGAVRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]