BacMap

Definition	Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession	NC_011959
Length	2,003,006

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The map label for this gene is xecD [H]

Identifier: 221632281

GI number: 221632281

Start: 254409

End: 255161

Strand: Reverse

Name: xecD [H]

Synonym: trd_0248

Alternate gene names: 221632281

Gene position: 255161-254409 (Counterclockwise)

Preceding gene: 221632282

Following gene: 221632280

Centisome position: 12.74

GC content: 64.81

Gene sequence:

>753_bases
ATGCAACTCCACGACCGTATCGCCCTCGTGACCGGTGCTGGTTCCGGGATCGGTCGTGCAATAGCCGAGCGGTTCGCCTC
CGCCGGTGCACTCGTCATCGCAGCGGATCTGGACGCCACTGCGGCCGAGGAAACAGCCCGGCGGGCACCGGAACGCATCG
TTCCCGACCACGTCGATGTGCGCGATGAAGCGAGCGTGCGCACGCTCATGGAGCGGACACTCGACCGCTTCGGTCGCCTC
GACATTTTGGTGAACAACGCCGGGATCGGCACGACGAAGGATCTCGTCGAGACTGATCTGGCCGAGTGGGAGAACGTTTT
CGCGGTCAATGTGCGTGGAGTCTTTTTGTGCTGCAAGTATGCGCTTCCCAGCATGCTCGCCCGCCGCTCGGGCGTGATCA
TCAATATCGGGTCGGTCGCCGGCCTCATCGGTATCCCCAAGCGAGCCGCCTATTGCGCGAGCAAGGGAGCTGTCGTCACC
TTGACCAAACAGATCGCCATCGCCTATGTCCGCGAAGGCATCCGCTGTAACTGCATCTGCCCAGGAACCGTCGACTCCCC
GTGGGTCGAGCGACTGGTCGCGCGAGAACCGGATCCGGTCGCCGCACGCCGAGCACTGGAAGCGCGCCAACCGATGGGGC
GCCTGGTGCAGCCAGAGGAGGTCGCGGCAGCCGCGCTCTACCTGGCTTCCGATGAGGCCGCCGCGGTGACCGGCAGCATT
CTCGTCATCGACGGTGGTTGGCTCGCCCAGTGA

Upstream 100 bases:

>100_bases
ATCGCACCCGTCATCGCGCTCGCACTCGTCCTCGAGCGGTACATCGCGCGCGGTCTTCTGCTCGGTGCCGTGCGCGGATG
AACAGGAGGAAGGCAGGCCG

Downstream 100 bases:

>100_bases
GGAGGTCGGGCCGATGAAATGCTATGGTCTCACCCTCTGCCTGCGCGACGATCCGGACGCGATCGCGGCCTACATCCAAT
ACCACCAGGCGGTCTGGCCG

Product: putative dehydrogenase

Products: NA

Alternate protein names: R-HPCDH; Aliphatic epoxide carboxylation component III [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MQLHDRIALVTGAGSGIGRAIAERFASAGALVIAADLDATAAEETARRAPERIVPDHVDVRDEASVRTLMERTLDRFGRL
DILVNNAGIGTTKDLVETDLAEWENVFAVNVRGVFLCCKYALPSMLARRSGVIINIGSVAGLIGIPKRAAYCASKGAVVT
LTKQIAIAYVREGIRCNCICPGTVDSPWVERLVAREPDPVAARRALEARQPMGRLVQPEEVAAAALYLASDEAAAVTGSI
LVIDGGWLAQ

Sequences:

>Translated_250_residues
MQLHDRIALVTGAGSGIGRAIAERFASAGALVIAADLDATAAEETARRAPERIVPDHVDVRDEASVRTLMERTLDRFGRL
DILVNNAGIGTTKDLVETDLAEWENVFAVNVRGVFLCCKYALPSMLARRSGVIINIGSVAGLIGIPKRAAYCASKGAVVT
LTKQIAIAYVREGIRCNCICPGTVDSPWVERLVAREPDPVAARRALEARQPMGRLVQPEEVAAAALYLASDEAAAVTGSI
LVIDGGWLAQ
>Mature_250_residues
MQLHDRIALVTGAGSGIGRAIAERFASAGALVIAADLDATAAEETARRAPERIVPDHVDVRDEASVRTLMERTLDRFGRL
DILVNNAGIGTTKDLVETDLAEWENVFAVNVRGVFLCCKYALPSMLARRSGVIINIGSVAGLIGIPKRAAYCASKGAVVT
LTKQIAIAYVREGIRCNCICPGTVDSPWVERLVAREPDPVAARRALEARQPMGRLVQPEEVAAAALYLASDEAAAVTGSI
LVIDGGWLAQ

Specific function: Catalyzes the oxidation of 2-(R)-hydroxyalkyl thioesters of CoM to 2-oxoalkyl thioesters of CoM. The enzyme highly specific for the R enantiomers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI66933014, Length=227, Percent_Identity=40.0881057268723, Blast_Score=161, Evalue=6e-40,
Organism=Homo sapiens, GI59889578, Length=227, Percent_Identity=40.9691629955947, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI15277342, Length=265, Percent_Identity=35.8490566037736, Blast_Score=139, Evalue=2e-33,
Organism=Homo sapiens, GI40254992, Length=249, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI31542939, Length=256, Percent_Identity=31.25, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=31.3725490196078, Blast_Score=120, Evalue=8e-28,
Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=8e-25,
Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=31.8725099601594, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI142976729, Length=223, Percent_Identity=31.8385650224215, Blast_Score=107, Evalue=8e-24,
Organism=Homo sapiens, GI109715829, Length=247, Percent_Identity=30.7692307692308, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI210032110, Length=197, Percent_Identity=36.0406091370558, Blast_Score=104, Evalue=7e-23,
Organism=Homo sapiens, GI4504505, Length=262, Percent_Identity=29.7709923664122, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI224922801, Length=200, Percent_Identity=32.5, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI40807363, Length=192, Percent_Identity=32.2916666666667, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=28.6852589641434, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4758504, Length=251, Percent_Identity=33.0677290836653, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI7706318, Length=205, Percent_Identity=31.219512195122, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI310128830, Length=206, Percent_Identity=28.6407766990291, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI310115468, Length=206, Percent_Identity=28.6407766990291, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI210032112, Length=193, Percent_Identity=31.0880829015544, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI20149619, Length=195, Percent_Identity=32.3076923076923, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI25282469, Length=212, Percent_Identity=30.188679245283, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=27.9527559055118, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI223718074, Length=206, Percent_Identity=33.9805825242718, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI209862901, Length=215, Percent_Identity=31.1627906976744, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI19923983, Length=215, Percent_Identity=31.1627906976744, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI83715985, Length=172, Percent_Identity=34.8837209302326, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=26.2948207171315, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI33667109, Length=195, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI7657478, Length=197, Percent_Identity=30.9644670050761, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI40254986, Length=188, Percent_Identity=30.3191489361702, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI225579078, Length=195, Percent_Identity=30.7692307692308, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI157739938, Length=166, Percent_Identity=27.1084337349398, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI186928839, Length=213, Percent_Identity=31.4553990610329, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=39.2857142857143, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1787335, Length=251, Percent_Identity=36.6533864541833, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1789208, Length=254, Percent_Identity=30.3149606299213, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1790717, Length=243, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786812, Length=254, Percent_Identity=33.8582677165354, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1788459, Length=248, Percent_Identity=31.8548387096774, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=37.3493975903614, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787905, Length=253, Percent_Identity=31.2252964426877, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=30.4, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789378, Length=256, Percent_Identity=31.25, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=31.4516129032258, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=27.906976744186, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1787820, Length=179, Percent_Identity=30.1675977653631, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787526, Length=244, Percent_Identity=29.0983606557377, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786701, Length=225, Percent_Identity=27.5555555555556, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=254, Percent_Identity=35.8267716535433, Blast_Score=134, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=35.3413654618474, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=31.3492063492063, Blast_Score=121, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17531453, Length=257, Percent_Identity=33.852140077821, Blast_Score=117, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=30.7086614173228, Blast_Score=114, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=29.6747967479675, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=32.295719844358, Blast_Score=110, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17562906, Length=256, Percent_Identity=32.03125, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17562908, Length=256, Percent_Identity=32.03125, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17560332, Length=264, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=34.6613545816733, Blast_Score=107, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17544670, Length=260, Percent_Identity=28.0769230769231, Blast_Score=107, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=31.4176245210728, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=27.5303643724696, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI193204405, Length=256, Percent_Identity=30.46875, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17564282, Length=195, Percent_Identity=33.8461538461538, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17538182, Length=251, Percent_Identity=32.2709163346614, Blast_Score=104, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI72000259, Length=254, Percent_Identity=30.3149606299213, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17508895, Length=236, Percent_Identity=28.3898305084746, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=29.4339622641509, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI193203117, Length=202, Percent_Identity=27.7227722772277, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=27.3764258555133, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI193203115, Length=197, Percent_Identity=28.4263959390863, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=29.277566539924, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=31.0861423220974, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=31.203007518797, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17536651, Length=252, Percent_Identity=28.968253968254, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17568967, Length=263, Percent_Identity=25.8555133079848, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562990, Length=251, Percent_Identity=29.8804780876494, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17560150, Length=251, Percent_Identity=28.2868525896414, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71997099, Length=214, Percent_Identity=31.7757009345794, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71982365, Length=141, Percent_Identity=36.1702127659575, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=262, Percent_Identity=29.3893129770992, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=30.0395256916996, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17555612, Length=220, Percent_Identity=32.2727272727273, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17563726, Length=251, Percent_Identity=26.2948207171315, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17508651, Length=252, Percent_Identity=26.1904761904762, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17561272, Length=251, Percent_Identity=29.8804780876494, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17558628, Length=141, Percent_Identity=31.9148936170213, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17560176, Length=197, Percent_Identity=28.4263959390863, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25152911, Length=215, Percent_Identity=29.7674418604651, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17567345, Length=156, Percent_Identity=29.4871794871795, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=262, Percent_Identity=29.3893129770992, Blast_Score=98, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6324126, Length=254, Percent_Identity=27.5590551181102, Blast_Score=92, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6323882, Length=251, Percent_Identity=27.8884462151394, Blast_Score=85, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6322067, Length=235, Percent_Identity=28.936170212766, Blast_Score=73, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6320089, Length=212, Percent_Identity=27.3584905660377, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=36.144578313253, Blast_Score=143, Evalue=1e-34,
Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=35.7142857142857, Blast_Score=134, Evalue=7e-32,
Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24644339, Length=257, Percent_Identity=35.408560311284, Blast_Score=128, Evalue=3e-30,
Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=33.4661354581673, Blast_Score=121, Evalue=5e-28,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=32.4, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI17737361, Length=256, Percent_Identity=35.15625, Blast_Score=117, Evalue=6e-27,
Organism=Drosophila melanogaster, GI18859837, Length=256, Percent_Identity=32.8125, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24643142, Length=242, Percent_Identity=31.404958677686, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281364892, Length=220, Percent_Identity=32.2727272727273, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21358495, Length=192, Percent_Identity=32.8125, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24644337, Length=189, Percent_Identity=34.3915343915344, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI21357673, Length=259, Percent_Identity=29.7297297297297, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24641232, Length=238, Percent_Identity=29.8319327731092, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI116007236, Length=241, Percent_Identity=29.8755186721992, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24649181, Length=154, Percent_Identity=29.8701298701299, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI221510726, Length=217, Percent_Identity=33.1797235023041, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24665243, Length=190, Percent_Identity=31.0526315789474, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI221331218, Length=190, Percent_Identity=31.0526315789474, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24640492, Length=234, Percent_Identity=24.7863247863248, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28571387, Length=241, Percent_Identity=29.4605809128631, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24665247, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221331216, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI116007238, Length=172, Percent_Identity=32.5581395348837, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116007234, Length=217, Percent_Identity=31.3364055299539, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21356301, Length=229, Percent_Identity=27.9475982532751, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24648944, Length=194, Percent_Identity=27.8350515463918, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24581726, Length=188, Percent_Identity=27.6595744680851, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24584744, Length=184, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574402, Length=184, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007232, Length=143, Percent_Identity=37.0629370629371, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355631, Length=157, Percent_Identity=27.3885350318471, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24640442, Length=189, Percent_Identity=31.7460317460317, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24656154, Length=266, Percent_Identity=25.5639097744361, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19922628, Length=266, Percent_Identity=25.5639097744361, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281364494, Length=197, Percent_Identity=28.9340101522843, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.268 [H]

Molecular weight: Translated: 26587; Mature: 26587

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLHDRIALVTGAGSGIGRAIAERFASAGALVIAADLDATAAEETARRAPERIVPDHVDV
CCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCHHCCCCCCCC
RDEASVRTLMERTLDRFGRLDILVNNAGIGTTKDLVETDLAEWENVFAVNVRGVFLCCKY
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCEEEEECHHHHHHHHH
ALPSMLARRSGVIINIGSVAGLIGIPKRAAYCASKGAVVTLTKQIAIAYVREGIRCNCIC
HHHHHHHHCCCEEEEECCHHHHHCCCCHHHHHHCCCCEEEHHHHHHHHHHHCCCEEEEEE
PGTVDSPWVERLVAREPDPVAARRALEARQPMGRLVQPEEVAAAALYLASDEAAAVTGSI
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEECEE
LVIDGGWLAQ
EEECCCEECC
>Mature Secondary Structure
MQLHDRIALVTGAGSGIGRAIAERFASAGALVIAADLDATAAEETARRAPERIVPDHVDV
CCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCHHCCCCCCCC
RDEASVRTLMERTLDRFGRLDILVNNAGIGTTKDLVETDLAEWENVFAVNVRGVFLCCKY
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCEEEEECHHHHHHHHH
ALPSMLARRSGVIINIGSVAGLIGIPKRAAYCASKGAVVTLTKQIAIAYVREGIRCNCIC
HHHHHHHHCCCEEEEECCHHHHHCCCCHHHHHHCCCCEEEHHHHHHHHHHHCCCEEEEEE
PGTVDSPWVERLVAREPDPVAARRALEARQPMGRLVQPEEVAAAALYLASDEAAAVTGSI
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEECEE
LVIDGGWLAQ
EEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704278; 9405410; 12524213 [H]