Click here to switch to the map view.

The map label for this gene is aga [H]

Identifier: 221232634

GI number: 221232634

Start: 1860685

End: 1862847

Strand: Reverse

Name: aga [H]

Synonym: SPN23F_19170

Alternate gene names: 221232634

Gene position: 1862847-1860685 (Counterclockwise)

Preceding gene: 221232637

Following gene: 221232633

Centisome position: 83.86

GC content: 37.26

Gene sequence:

>2163_bases
ATGGGAGTTAGGATAGAGAATAATCTATTTTATGTTGAGAGTAAAAATCTAAGTTTGATTATTGAAAATCGAAATGGCTA
CTTACTTTTGAAACATTTAGGAAAGACTATTAAGAACTATAAAGGTTCCAATAGTGTTTATGAACGAGACCATGCCTTTT
CAGGAAATCCAACGGCTACTAATCGAACCTTTAGTTTAGATACTCAACGTCAAATTTTTGGACAACATGGCTTAGGAGAT
TTTAGGAAACCAACCATACAGGTTCAGCATAATGTAACTGAAGTAACAGACTTTCGATTTGTAGAAGCAAAGATTTTAAA
AGGTCAGAATGGTCCACAGGGCTTACCTTCTCCACATAGCATGGACGATACAGAGACTCTTGTCTTAATGTTAGAAGATT
CTAAGGCTCAACTTAGTCTGACTTTGTATTATACTACTTTTAATAATGATGCGACTATTGCTAGCTACAGTAAATTAGAT
AATAATAGTAATCAGGAAGTTGTCATCCATAAAGATTTTTCTTTTATGGCTGATTTTCCAGCTGCAGATTATGAAATAGC
AACTCTGCAGGGTGCTTATGCTCGTGAAAAGACTGTTAGACGTCAACAGGTAGAACAAGGAATCTTTTCGATTAGTTCAA
ACCGAGGTGCTTCTGGTCATGCTCAAACACCAGCTCTTCTACTATGCGAACAAGGAGTCACAGAGGATGCTGGGAATGTG
TTTGCTATTCAACTAATGTATAGTGGCAACTTTGAAGCTTTTGTTCAAAAAAATCAATTGAATGAAGTTCGGGTGGCTAT
TGGCATTAATCCAGAAAACTTTTCTTGGAAGTTAGCCCCTGAGGAATACTTTGAAACACCGGTAGCTTTAGTGACTCATT
CAGATCAGGGATTAACTGGTATTAGTCATGAAAGTCAGAATTTTGTACTGAAGCACATTATGCTAAGTGAATTTTCTAAA
AAAGAACGTCCAATTCTAATCAATAACTGGGAAGCTACTTACTTTGACTTTCAGAGAGAAAAACTGTTAGAGTTAGCAGA
TGAAGCTAAGAAAGTTGGCATTGAACTTTTTGTATTAGATGATGGTTGGTTTGGCAATCGTTTTGATGATAATCGTGCTT
TAGGTGATTGGGTTGTTAATGAGGAAAAACTGGGTGGAAGTCTAGAAAGTCTGATTTCAGCTATCCATGAAAGAGGTTTG
CAGTTTGGACTTTGGTTAGAACCCGAAATGATTTCTGTAGATAGTGATTTGTATCGTCAACATCCTGACTGGGCTATTCA
GGTTCCTGATTATGAGCATACTTATTCTCGGAATCAATTAGTACTTAATCTTGCCAATCCTCAGGTAGTAGAATACTTGA
AAAGTGTCTTAGATCAACTCCTATCTTATCATGAGATTGATTACATTAAATGGGATATGAACCGCAATATCACTAAGCTA
GGGAATGGATTAACTTATCTAGAGACACAGATGCAATCTCATCAGTACATGCTGGGGCTTTACGAACTCGTTTCTTATCT
GACAGAGAAGCACAGCCATATTCTCTTTGAGTCCTGCTCTGGTGGTGGTGGACGAAATGATCTTGGTATGATACGCTATT
TCCCACAAGTCTGGGCTAGTGATAATACTGATGCCATTGCACGTTTACCAATTCAATACGGTTCATCCTATCTCTATCCA
ACCATTTCTATGGGGGCTCATGTGTCAGCAGTACCGAATCATCAGATGGGACGAATGACACCATTAGAAACACGTGGCCA
TGTAGCAATGATGGGAAATTTGGGCTATGAGCTTGATTTGACAAATTTATCAGATGAAGAGAAAGCTACGATTGCTAATC
AGGTGAACTTGTATAAAGAATTACGACCAGTAGTTCAGTTAGGACAGCAGTATAGACTAATTAATCCTGATACTGCATCC
AATGAAGCAGCTGTACAATTTAATTACGGAAATCAAACGATTGTAACCTACGTTCGCGTTTTATCTGTTGTAGAGACCAT
GGAAACAACTTTAAAATTAAAAGATTTGGATGAAGAGGGACTATATAAATTACAGGAAAATGGCGAAGTTTACTCAGGTG
CAGAACTAATGTATGCGGGCTTAACTGTTATCTTATCCCAAGGAGATTTTTTGAGTAGACAGTATATTTTTAGAAAACTA
TGA

Upstream 100 bases:

>100_bases
CTCCTACCTAACATTTTACCATATTCTTGAGACATTTTTCTATTTTGGAAAGCGATTTCAGGTGATAAAATATAATCAAT
AAAGTGATGAGGTGAAGTAA

Downstream 100 bases:

>100_bases
TATGTACTGACCCCAAAAGTTAGATTTATTCTGTCTAACTTTTGGGGTGCAGTTCAATAAGGGTGTATAAATTTATAAAG
GAGGCTTTCTAATGGAATGG

Product: alpha-galactosidase

Products: NA

Alternate protein names: Melibiase [H]

Number of amino acids: Translated: 720; Mature: 719

Protein sequence:

>720_residues
MGVRIENNLFYVESKNLSLIIENRNGYLLLKHLGKTIKNYKGSNSVYERDHAFSGNPTATNRTFSLDTQRQIFGQHGLGD
FRKPTIQVQHNVTEVTDFRFVEAKILKGQNGPQGLPSPHSMDDTETLVLMLEDSKAQLSLTLYYTTFNNDATIASYSKLD
NNSNQEVVIHKDFSFMADFPAADYEIATLQGAYAREKTVRRQQVEQGIFSISSNRGASGHAQTPALLLCEQGVTEDAGNV
FAIQLMYSGNFEAFVQKNQLNEVRVAIGINPENFSWKLAPEEYFETPVALVTHSDQGLTGISHESQNFVLKHIMLSEFSK
KERPILINNWEATYFDFQREKLLELADEAKKVGIELFVLDDGWFGNRFDDNRALGDWVVNEEKLGGSLESLISAIHERGL
QFGLWLEPEMISVDSDLYRQHPDWAIQVPDYEHTYSRNQLVLNLANPQVVEYLKSVLDQLLSYHEIDYIKWDMNRNITKL
GNGLTYLETQMQSHQYMLGLYELVSYLTEKHSHILFESCSGGGGRNDLGMIRYFPQVWASDNTDAIARLPIQYGSSYLYP
TISMGAHVSAVPNHQMGRMTPLETRGHVAMMGNLGYELDLTNLSDEEKATIANQVNLYKELRPVVQLGQQYRLINPDTAS
NEAAVQFNYGNQTIVTYVRVLSVVETMETTLKLKDLDEEGLYKLQENGEVYSGAELMYAGLTVILSQGDFLSRQYIFRKL

Sequences:

>Translated_720_residues
MGVRIENNLFYVESKNLSLIIENRNGYLLLKHLGKTIKNYKGSNSVYERDHAFSGNPTATNRTFSLDTQRQIFGQHGLGD
FRKPTIQVQHNVTEVTDFRFVEAKILKGQNGPQGLPSPHSMDDTETLVLMLEDSKAQLSLTLYYTTFNNDATIASYSKLD
NNSNQEVVIHKDFSFMADFPAADYEIATLQGAYAREKTVRRQQVEQGIFSISSNRGASGHAQTPALLLCEQGVTEDAGNV
FAIQLMYSGNFEAFVQKNQLNEVRVAIGINPENFSWKLAPEEYFETPVALVTHSDQGLTGISHESQNFVLKHIMLSEFSK
KERPILINNWEATYFDFQREKLLELADEAKKVGIELFVLDDGWFGNRFDDNRALGDWVVNEEKLGGSLESLISAIHERGL
QFGLWLEPEMISVDSDLYRQHPDWAIQVPDYEHTYSRNQLVLNLANPQVVEYLKSVLDQLLSYHEIDYIKWDMNRNITKL
GNGLTYLETQMQSHQYMLGLYELVSYLTEKHSHILFESCSGGGGRNDLGMIRYFPQVWASDNTDAIARLPIQYGSSYLYP
TISMGAHVSAVPNHQMGRMTPLETRGHVAMMGNLGYELDLTNLSDEEKATIANQVNLYKELRPVVQLGQQYRLINPDTAS
NEAAVQFNYGNQTIVTYVRVLSVVETMETTLKLKDLDEEGLYKLQENGEVYSGAELMYAGLTVILSQGDFLSRQYIFRKL
>Mature_719_residues
GVRIENNLFYVESKNLSLIIENRNGYLLLKHLGKTIKNYKGSNSVYERDHAFSGNPTATNRTFSLDTQRQIFGQHGLGDF
RKPTIQVQHNVTEVTDFRFVEAKILKGQNGPQGLPSPHSMDDTETLVLMLEDSKAQLSLTLYYTTFNNDATIASYSKLDN
NSNQEVVIHKDFSFMADFPAADYEIATLQGAYAREKTVRRQQVEQGIFSISSNRGASGHAQTPALLLCEQGVTEDAGNVF
AIQLMYSGNFEAFVQKNQLNEVRVAIGINPENFSWKLAPEEYFETPVALVTHSDQGLTGISHESQNFVLKHIMLSEFSKK
ERPILINNWEATYFDFQREKLLELADEAKKVGIELFVLDDGWFGNRFDDNRALGDWVVNEEKLGGSLESLISAIHERGLQ
FGLWLEPEMISVDSDLYRQHPDWAIQVPDYEHTYSRNQLVLNLANPQVVEYLKSVLDQLLSYHEIDYIKWDMNRNITKLG
NGLTYLETQMQSHQYMLGLYELVSYLTEKHSHILFESCSGGGGRNDLGMIRYFPQVWASDNTDAIARLPIQYGSSYLYPT
ISMGAHVSAVPNHQMGRMTPLETRGHVAMMGNLGYELDLTNLSDEEKATIANQVNLYKELRPVVQLGQQYRLINPDTASN
EAAVQFNYGNQTIVTYVRVLSVVETMETTLKLKDLDEEGLYKLQENGEVYSGAELMYAGLTVILSQGDFLSRQYIFRKL

Specific function: Unknown

COG id: COG3345

COG function: function code G; Alpha-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 36 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002252
- InterPro:   IPR017853
- InterPro:   IPR000111 [H]

Pfam domain/function: PF02065 Melibiase [H]

EC number: =3.2.1.22 [H]

Molecular weight: Translated: 81707; Mature: 81576

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00512 ALPHA_GALACTOSIDASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVRIENNLFYVESKNLSLIIENRNGYLLLKHLGKTIKNYKGSNSVYERDHAFSGNPTAT
CCEEEECCEEEEECCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
NRTFSLDTQRQIFGQHGLGDFRKPTIQVQHNVTEVTDFRFVEAKILKGQNGPQGLPSPHS
CEEEECCHHHHHHCCCCCCCCCCCEEEEECCCCHHHCEEEEEEEEECCCCCCCCCCCCCC
MDDTETLVLMLEDSKAQLSLTLYYTTFNNDATIASYSKLDNNSNQEVVIHKDFSFMADFP
CCCCCEEEEEEECCCCEEEEEEEEEEECCCCEEEEHHHCCCCCCCEEEEECCCHHEECCC
AADYEIATLQGAYAREKTVRRQQVEQGIFSISSNRGASGHAQTPALLLCEQGVTEDAGNV
CCCEEEEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCCCCCE
FAIQLMYSGNFEAFVQKNQLNEVRVAIGINPENFSWKLAPEEYFETPVALVTHSDQGLTG
EEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCEEEECCHHHHCCCEEEEEECCCCCCC
ISHESQNFVLKHIMLSEFSKKERPILINNWEATYFDFQREKLLELADEAKKVGIELFVLD
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHCCEEEEEEE
DGWFGNRFDDNRALGDWVVNEEKLGGSLESLISAIHERGLQFGLWLEPEMISVDSDLYRQ
CCCCCCCCCCCCCCCCCEECHHHCCCHHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHC
HPDWAIQVPDYEHTYSRNQLVLNLANPQVVEYLKSVLDQLLSYHEIDYIKWDMNRNITKL
CCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH
GNGLTYLETQMQSHQYMLGLYELVSYLTEKHSHILFESCSGGGGRNDLGMIRYFPQVWAS
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC
DNTDAIARLPIQYGSSYLYPTISMGAHVSAVPNHQMGRMTPLETRGHVAMMGNLGYELDL
CCCCCEEEEEHHHCCCEECEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEE
TNLSDEEKATIANQVNLYKELRPVVQLGQQYRLINPDTASNEAAVQFNYGNQTIVTYVRV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHH
LSVVETMETTLKLKDLDEEGLYKLQENGEVYSGAELMYAGLTVILSQGDFLSRQYIFRKL
HHHHHHHHHHEEEECCCHHHCEEECCCCCEECCCHHHHCCEEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure 
GVRIENNLFYVESKNLSLIIENRNGYLLLKHLGKTIKNYKGSNSVYERDHAFSGNPTAT
CEEEECCEEEEECCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
NRTFSLDTQRQIFGQHGLGDFRKPTIQVQHNVTEVTDFRFVEAKILKGQNGPQGLPSPHS
CEEEECCHHHHHHCCCCCCCCCCCEEEEECCCCHHHCEEEEEEEEECCCCCCCCCCCCCC
MDDTETLVLMLEDSKAQLSLTLYYTTFNNDATIASYSKLDNNSNQEVVIHKDFSFMADFP
CCCCCEEEEEEECCCCEEEEEEEEEEECCCCEEEEHHHCCCCCCCEEEEECCCHHEECCC
AADYEIATLQGAYAREKTVRRQQVEQGIFSISSNRGASGHAQTPALLLCEQGVTEDAGNV
CCCEEEEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCCCCCE
FAIQLMYSGNFEAFVQKNQLNEVRVAIGINPENFSWKLAPEEYFETPVALVTHSDQGLTG
EEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCEEEECCHHHHCCCEEEEEECCCCCCC
ISHESQNFVLKHIMLSEFSKKERPILINNWEATYFDFQREKLLELADEAKKVGIELFVLD
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHCCEEEEEEE
DGWFGNRFDDNRALGDWVVNEEKLGGSLESLISAIHERGLQFGLWLEPEMISVDSDLYRQ
CCCCCCCCCCCCCCCCCEECHHHCCCHHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHC
HPDWAIQVPDYEHTYSRNQLVLNLANPQVVEYLKSVLDQLLSYHEIDYIKWDMNRNITKL
CCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH
GNGLTYLETQMQSHQYMLGLYELVSYLTEKHSHILFESCSGGGGRNDLGMIRYFPQVWAS
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC
DNTDAIARLPIQYGSSYLYPTISMGAHVSAVPNHQMGRMTPLETRGHVAMMGNLGYELDL
CCCCCEEEEEHHHCCCEECEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEE
TNLSDEEKATIANQVNLYKELRPVVQLGQQYRLINPDTASNEAAVQFNYGNQTIVTYVRV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHH
LSVVETMETTLKLKDLDEEGLYKLQENGEVYSGAELMYAGLTVILSQGDFLSRQYIFRKL
HHHHHHHHHHEEEECCCHHHCEEECCCCCEECCCHHHHCCEEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1649890; 1660918; 12397186 [H]