| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is htpX
Identifier: 221230698
GI number: 221230698
Start: 2701192
End: 2702055
Strand: Direct
Name: htpX
Synonym: MLBr_02278
Alternate gene names: 221230698
Gene position: 2701192-2702055 (Clockwise)
Preceding gene: 221230697
Following gene: 221230700
Centisome position: 82.65
GC content: 60.42
Gene sequence:
>864_bases ATGACCTGGCATCCCCAAGCAAACAGGTTGAAGACCTTCGTCCTGTTGGTCGGTATGTCCACATTGATCGTGGTTGTCGG CGCGATATTTGGCAGGACGGCGCTTTTCTTTGCGACCCTGGTTGCTGTAGGAATCAACGTCTACACGTACTACAACAGTG ACAAGCTCGCGTTACGGGCGATGCATGCGCAACCGGTTTCGGAGGTGCAAGCACCGGTGATGTACCGGATCGTGCGCGAG CTGGCTACCGGAGCGCACCAGCCGATGCCGCGGCTCTATATAAGTGATACAAACGCGCCCAACGCTTTCGCCACTGGCCG TAATCCACGCAATGCCGCGGTGTGTTGCACTACCGGCATATTGGAGATCCTCAACGAGCGCGAGCTGCGTGCCGTGCTGG GGCACGAACTCTCTCACGTGTACAACCGTGACATTCTGATCTCCTGTGTGGCCGGTGCGCTGGCAGGCGTGATTACCGCG CTGGCCAACATGGCCATGTGGGCTGGCACGTTTGGCACCACTCGGGACGAAGAGAATCCTTTTGCACTGCTGCTGGTTTC GTTACTGGGCCCGATCGCCGCGACGGTGGTGCGACTAGCGGTATCGCGATCGCGGGAGTATCAGGCCGACGAATCGGGCG CTATGCTCACCGGCGACCCTCTGGCCCTGGCGTCGGCGTTACGCAAGATTTCCAGCGGCGTACAGGCAGCGCCGTTGCCC CCGGAACCGCAGCTGGCCAGCCAGGCGCACTTGATGATCGCCAACCCGTTCCGTGTTGGCGATCGGATCGGGTCACTGTT CTCGACACACCCGCCGATCGAAGACCGCATTCGCCGGCTAGAAACGATGGTGGCTGGTCGATAA
Upstream 100 bases:
>100_bases ACTCCTGGGTCGCGGAACCCGCAGGGTTGTCCTGGGCGTTAAATTGTCAGTAGTCCGCAAGAACCGTTGTGTGTCGAAAC CTTTGCAAGGAGGACACTGA
Downstream 100 bases:
>100_bases GAACTAACCTGCACCCCTCCTGGTCTAAACGTCGAGCTGACCTTCGGGTCAGAACATGCGTGGTTTCGCTGAGTTGATAT CGCATGTTCCTGCTGTCTGT
Product: heat shock protein HtpX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTWHPQANRLKTFVLLVGMSTLIVVVGAIFGRTALFFATLVAVGINVYTYYNSDKLALRAMHAQPVSEVQAPVMYRIVRE LATGAHQPMPRLYISDTNAPNAFATGRNPRNAAVCCTTGILEILNERELRAVLGHELSHVYNRDILISCVAGALAGVITA LANMAMWAGTFGTTRDEENPFALLLVSLLGPIAATVVRLAVSRSREYQADESGAMLTGDPLALASALRKISSGVQAAPLP PEPQLASQAHLMIANPFRVGDRIGSLFSTHPPIEDRIRRLETMVAGR
Sequences:
>Translated_287_residues MTWHPQANRLKTFVLLVGMSTLIVVVGAIFGRTALFFATLVAVGINVYTYYNSDKLALRAMHAQPVSEVQAPVMYRIVRE LATGAHQPMPRLYISDTNAPNAFATGRNPRNAAVCCTTGILEILNERELRAVLGHELSHVYNRDILISCVAGALAGVITA LANMAMWAGTFGTTRDEENPFALLLVSLLGPIAATVVRLAVSRSREYQADESGAMLTGDPLALASALRKISSGVQAAPLP PEPQLASQAHLMIANPFRVGDRIGSLFSTHPPIEDRIRRLETMVAGR >Mature_286_residues TWHPQANRLKTFVLLVGMSTLIVVVGAIFGRTALFFATLVAVGINVYTYYNSDKLALRAMHAQPVSEVQAPVMYRIVREL ATGAHQPMPRLYISDTNAPNAFATGRNPRNAAVCCTTGILEILNERELRAVLGHELSHVYNRDILISCVAGALAGVITAL ANMAMWAGTFGTTRDEENPFALLLVSLLGPIAATVVRLAVSRSREYQADESGAMLTGDPLALASALRKISSGVQAAPLPP EPQLASQAHLMIANPFRVGDRIGSLFSTHPPIEDRIRRLETMVAGR
Specific function: Unknown Function. Overexpression Of A Truncated Form Of The Htpx Protein Leads To An Increase In The Degradation Of Abnormal Proteins. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family
Homologues:
Organism=Escherichia coli, GI1788133, Length=265, Percent_Identity=29.811320754717, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HTPX_MYCLB (B8ZSY8)
Other databases:
- EMBL: FM211192 - RefSeq: YP_002504114.1 - ProteinModelPortal: B8ZSY8 - EnsemblBacteria: EBMYCT00000086947 - GeneID: 7324880 - GenomeReviews: FM211192_GR - GeneTree: EBGT00050000016372 - HOGENOM: HBG739460 - OMA: RRGAEIC - ProtClustDB: PRK03072 - GO: GO:0006508 - HAMAP: MF_00188 - InterPro: IPR022919 - InterPro: IPR001915
Pfam domain/function: PF01435 Peptidase_M48
EC number: 3.4.24.-
Molecular weight: Translated: 30998; Mature: 30867
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: ACT_SITE 136-136
Signals:
None
Transmembrane regions:
HASH(0x218bed80)-; HASH(0x4524bad8)-; HASH(0x4524c570)-; HASH(0x21c01b5c)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWHPQANRLKTFVLLVGMSTLIVVVGAIFGRTALFFATLVAVGINVYTYYNSDKLALRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHH MHAQPVSEVQAPVMYRIVRELATGAHQPMPRLYISDTNAPNAFATGRNPRNAAVCCTTGI HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHH LEILNERELRAVLGHELSHVYNRDILISCVAGALAGVITALANMAMWAGTFGTTRDEENP HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC FALLLVSLLGPIAATVVRLAVSRSREYQADESGAMLTGDPLALASALRKISSGVQAAPLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCCC PEPQLASQAHLMIANPFRVGDRIGSLFSTHPPIEDRIRRLETMVAGR CCCCHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCH >Mature Secondary Structure TWHPQANRLKTFVLLVGMSTLIVVVGAIFGRTALFFATLVAVGINVYTYYNSDKLALRA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHH MHAQPVSEVQAPVMYRIVRELATGAHQPMPRLYISDTNAPNAFATGRNPRNAAVCCTTGI HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHH LEILNERELRAVLGHELSHVYNRDILISCVAGALAGVITALANMAMWAGTFGTTRDEENP HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC FALLLVSLLGPIAATVVRLAVSRSREYQADESGAMLTGDPLALASALRKISSGVQAAPLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCCC PEPQLASQAHLMIANPFRVGDRIGSLFSTHPPIEDRIRRLETMVAGR CCCCHHCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA